Gene info for JDDGAC_22290 in Escherichia coli ECRC98

Name: rpoD
Annotation: RNA polymerase sigma factor RpoD
Type 1: Protein-coding gene
Located on scaffold contig_1, - strand, nucleotides 4,263,552 to 4,265,393
See nucleotide sequence around JDDGAC_22290 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntaer and nfeR are separated by 153 nucleotidesnfeR and nfeF are separated by 287 nucleotidesnfeF and Ile2_trna are separated by 53 nucleotidesIle2_trna and mug are separated by 124 nucleotidesmug and rpoD are separated by 78 nucleotidesrpoD and dnaG are separated by 194 nucleotidesdnaG and rpsU are separated by 110 nucleotidesrpsU and tsaD are separated by 237 nucleotidestsaD and ttdT are separated by 42 nucleotidesttdT and ttdB are separated by 48 nucleotides JDDGAC_22265: aer - aerotaxis sensor receptor Aer, at 4,259,364 to 4,260,884 aer JDDGAC_22270: nfeR - DNA-binding transcriptional regulator NfeR, at 4,261,038 to 4,261,661 nfeR JDDGAC_22275: nfeF - NADPH-dependent ferric chelate reductase, at 4,261,949 to 4,262,713 nfeF JDDGAC_22280: Ile2_trna - tRNA-Ile2(cat), at 4,262,767 to 4,262,842 _trna JDDGAC_22285: mug - G/U mismatch-specific DNA glycosylase, at 4,262,967 to 4,263,473 mug JDDGAC_22290: rpoD - RNA polymerase sigma factor RpoD, at 4,263,552 to 4,265,393 rpoD JDDGAC_22295: dnaG - DNA primase, at 4,265,588 to 4,267,333 dnaG JDDGAC_22300: rpsU - 30S ribosomal protein S21, at 4,267,444 to 4,267,659 rpsU JDDGAC_22305: tsaD - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 4,267,897 to 4,268,910 tsaD JDDGAC_22310: ttdT - L-tartrate/succinate antiporter, at 4,268,953 to 4,270,416 ttdT JDDGAC_22315: ttdB - L(+)-tartrate dehydratase subunit beta, at 4,270,465 to 4,271,070 ttdB
Locus Name Description Strand Phenotype
JDDGAC_22265 aer aerotaxis sensor receptor Aer + insig.
JDDGAC_22270 nfeR DNA-binding transcriptional regulator NfeR - insig.
JDDGAC_22275 nfeF NADPH-dependent ferric chelate reductase + insig.
JDDGAC_22280 Ile2_trna tRNA-Ile2(cat) - no data
JDDGAC_22285 mug G/U mismatch-specific DNA glycosylase + insig.
JDDGAC_22290 rpoD RNA polymerase sigma factor RpoD - no data
JDDGAC_22295 dnaG DNA primase - no data
JDDGAC_22300 rpsU 30S ribosomal protein S21 - no data
JDDGAC_22305 tsaD tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD + no data
JDDGAC_22310 ttdT L-tartrate/succinate antiporter - insig.
JDDGAC_22315 ttdB L(+)-tartrate dehydratase subunit beta - insig.

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