Gene info for JDDGAC_21580 in Escherichia coli ECRC98

Name: lptC
Annotation: LPS export ABC transporter periplasmic protein LptC
Type 1: Protein-coding gene
Located on scaffold contig_1, - strand, nucleotides 4,132,319 to 4,132,894
See nucleotide sequence around JDDGAC_21580 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntptsN and JDDGAC_21560 are separated by 117 nucleotidesJDDGAC_21560 and rpoN are separated by 22 nucleotidesrpoN and lptB are separated by 47 nucleotideslptB and lptA are separated by 6 nucleotideslptA and lptC overlap by 32 nucleotideslptC and kdsC overlap by 4 nucleotideskdsC and kdsD are separated by 20 nucleotideskdsD and yrbG are separated by 13 nucleotidesyrbG and mlaF are separated by 209 nucleotidesmlaF and mlaE are separated by 7 nucleotides JDDGAC_21555: ptsN - PTS IIA-like nitrogen regulatory protein PtsN, at 4,128,661 to 4,129,152 ptsN JDDGAC_21560: JDDGAC_21560 - Ribosome hibernation promoting factor, at 4,129,270 to 4,129,557 _21560 JDDGAC_21565: rpoN - RNA polymerase factor sigma-54, at 4,129,580 to 4,131,013 rpoN JDDGAC_21570: lptB - LPS export ABC transporter ATP-binding protein, at 4,131,061 to 4,131,786 lptB JDDGAC_21575: lptA - lipopolysaccharide ABC transporter substrate-binding protein LptA, at 4,131,793 to 4,132,350 lptA JDDGAC_21580: lptC - LPS export ABC transporter periplasmic protein LptC, at 4,132,319 to 4,132,894 lptC JDDGAC_21585: kdsC - 3-deoxy-manno-octulosonate-8-phosphatase KdsC, at 4,132,891 to 4,133,457 kdsC JDDGAC_21590: kdsD - arabinose-5-phosphate isomerase KdsD, at 4,133,478 to 4,134,464 kdsD JDDGAC_21595: yrbG - calcium/sodium antiporter, at 4,134,478 to 4,135,455 yrbG JDDGAC_21600: mlaF - phospholipid ABC transporter ATP-binding protein MlaF, at 4,135,665 to 4,136,474 mlaF JDDGAC_21605: mlaE - lipid asymmetry maintenance ABC transporter permease subunit MlaE, at 4,136,482 to 4,137,264 mlaE
Locus Name Description Strand Phenotype
JDDGAC_21555 ptsN PTS IIA-like nitrogen regulatory protein PtsN - no data
JDDGAC_21560 JDDGAC_21560 Ribosome hibernation promoting factor - cofit
JDDGAC_21565 rpoN RNA polymerase factor sigma-54 - no data
JDDGAC_21570 lptB LPS export ABC transporter ATP-binding protein - no data
JDDGAC_21575 lptA lipopolysaccharide ABC transporter substrate-binding protein LptA - no data
JDDGAC_21580 lptC LPS export ABC transporter periplasmic protein LptC - cofit
JDDGAC_21585 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC - cofit
JDDGAC_21590 kdsD arabinose-5-phosphate isomerase KdsD - cofit
JDDGAC_21595 yrbG calcium/sodium antiporter - insig.
JDDGAC_21600 mlaF phospholipid ABC transporter ATP-binding protein MlaF + strong
JDDGAC_21605 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE + strong

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