Gene info for JDDGAC_09110 in Escherichia coli ECRC98

Name: ycaO
Annotation: 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
Type 1: Protein-coding gene
Located on scaffold contig_1, + strand, nucleotides 1,607,865 to 1,609,625
See nucleotide sequence around JDDGAC_09110 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntcmk and ycaL are separated by 172 nucleotidesycaL and aroA are separated by 168 nucleotidesaroA and serC are separated by 70 nucleotidesserC and ycaP are separated by 198 nucleotidesycaP and ycaO are separated by 129 nucleotidesycaO and focA are separated by 405 nucleotidesfocA and pflB are separated by 54 nucleotidespflB and ogrK are separated by 318 nucleotidesogrK and JDDGAC_09130 are separated by 81 nucleotidesJDDGAC_09130 and JDDGAC_09135 overlap by 1 nucleotides JDDGAC_09085: cmk - (d)CMP kinase, at 1,602,613 to 1,603,296 cmk JDDGAC_09090: ycaL - metallopeptidase YcaL, at 1,603,469 to 1,604,233 ycaL JDDGAC_09095: aroA - 3-phosphoshikimate 1-carboxyvinyltransferase, at 1,604,402 to 1,605,685 aroA JDDGAC_09100: serC - 3-phosphoserine/phosphohydroxythreonine transaminase, at 1,605,756 to 1,606,844 serC JDDGAC_09105: ycaP - UPF0702 transmembrane protein YcaP, at 1,607,043 to 1,607,735 ycaP JDDGAC_09110: ycaO - 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO, at 1,607,865 to 1,609,625 ycaO JDDGAC_09115: focA - formate transporter FocA, at 1,610,031 to 1,610,888 focA JDDGAC_09120: pflB - formate C-acetyltransferase, at 1,610,943 to 1,613,225 pflB JDDGAC_09125: ogrK - prophage transcriptional regulator OgrK, at 1,613,544 to 1,613,762 ogrK JDDGAC_09130: JDDGAC_09130 - putative baseplate hub protein, at 1,613,844 to 1,615,007 _09130 JDDGAC_09135: JDDGAC_09135 - phage tail protein, at 1,615,007 to 1,615,486 _09135
Locus Name Description Strand Phenotype
JDDGAC_09085 cmk (d)CMP kinase - no data
JDDGAC_09090 ycaL metallopeptidase YcaL - insig.
JDDGAC_09095 aroA 3-phosphoshikimate 1-carboxyvinyltransferase - strong
JDDGAC_09100 serC 3-phosphoserine/phosphohydroxythreonine transaminase - strong
JDDGAC_09105 ycaP UPF0702 transmembrane protein YcaP - insig.
JDDGAC_09110 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO + insig.
JDDGAC_09115 focA formate transporter FocA + insig.
JDDGAC_09120 pflB formate C-acetyltransferase + insig.
JDDGAC_09125 ogrK prophage transcriptional regulator OgrK - strong
JDDGAC_09130 JDDGAC_09130 putative baseplate hub protein - strong
JDDGAC_09135 JDDGAC_09135 phage tail protein - strong

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