Gene info for HMPREF1181_RS17260 in Bacteroides stercoris CC31F

Annotation: transposase
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_KE340311, - strand, nucleotides 68,096 to 69,078
See nucleotide sequence around HMPREF1181_RS17260 or for all of scaffold NZ_KE340311

Nearby Genes

500 ntHMPREF1181_RS04085 and HMPREF1181_RS04090 are separated by 28 nucleotidesHMPREF1181_RS04090 and HMPREF1181_RS04095 are separated by 13 nucleotidesHMPREF1181_RS04095 and HMPREF1181_RS04100 are separated by 10 nucleotidesHMPREF1181_RS04100 and HMPREF1181_RS04110 are separated by 541 nucleotidesHMPREF1181_RS04110 and HMPREF1181_RS17260 are separated by 97 nucleotidesHMPREF1181_RS17260 and HMPREF1181_RS04120 are separated by 329 nucleotidesHMPREF1181_RS04120 and HMPREF1181_RS04125 overlap by 4 nucleotidesHMPREF1181_RS04125 and HMPREF1181_RS04130 are separated by 8 nucleotidesHMPREF1181_RS04130 and HMPREF1181_RS04135 are separated by 355 nucleotidesHMPREF1181_RS04135 and HMPREF1181_RS04140 are separated by 108 nucleotides HMPREF1181_RS04085: HMPREF1181_RS04085 - discoidin domain-containing protein, at 60,465 to 62,210 _RS04085 HMPREF1181_RS04090: HMPREF1181_RS04090 - DUF4434 domain-containing protein, at 62,239 to 63,633 _RS04090 HMPREF1181_RS04095: HMPREF1181_RS04095 - AGE family epimerase/isomerase, at 63,647 to 64,822 _RS04095 HMPREF1181_RS04100: HMPREF1181_RS04100 - sugar porter family MFS transporter, at 64,833 to 66,248 _RS04100 HMPREF1181_RS04110: HMPREF1181_RS04110 - ROK family transcriptional regulator, at 66,790 to 67,998 _RS04110 HMPREF1181_RS17260: HMPREF1181_RS17260 - transposase, at 68,096 to 69,078 _RS17260 HMPREF1181_RS04120: HMPREF1181_RS04120 - UpxY family transcription antiterminator, at 69,408 to 69,734 _RS04120 HMPREF1181_RS04125: HMPREF1181_RS04125 - hypothetical protein, at 69,731 to 70,840 _RS04125 HMPREF1181_RS04130: HMPREF1181_RS04130 - SLBB domain-containing protein, at 70,849 to 73,368 _RS04130 HMPREF1181_RS04135: HMPREF1181_RS04135 - tRNA-Thr, at 73,724 to 73,796 _RS04135 HMPREF1181_RS04140: HMPREF1181_RS04140 - transposase, at 73,905 to 74,897 _RS04140
Locus Name Description Strand Phenotype
HMPREF1181_RS04085 HMPREF1181_RS04085 discoidin domain-containing protein - insig.
HMPREF1181_RS04090 HMPREF1181_RS04090 DUF4434 domain-containing protein - insig.
HMPREF1181_RS04095 HMPREF1181_RS04095 AGE family epimerase/isomerase - insig.
HMPREF1181_RS04100 HMPREF1181_RS04100 sugar porter family MFS transporter - insig.
HMPREF1181_RS04110 HMPREF1181_RS04110 ROK family transcriptional regulator + cofit
HMPREF1181_RS17260 HMPREF1181_RS17260 transposase - insig.
HMPREF1181_RS04120 HMPREF1181_RS04120 UpxY family transcription antiterminator - strong
HMPREF1181_RS04125 HMPREF1181_RS04125 hypothetical protein - strong
HMPREF1181_RS04130 HMPREF1181_RS04130 SLBB domain-containing protein - strong
HMPREF1181_RS04135 HMPREF1181_RS04135 tRNA-Thr + cofit
HMPREF1181_RS04140 HMPREF1181_RS04140 transposase - no data

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