Gene info for HMPREF1181_RS16950 in Bacteroides stercoris CC31F

Annotation: RNA polymerase sigma factor
Type 1: Protein-coding gene
Located on scaffold NZ_KE340318, - strand, nucleotides 106,350 to 106,853
See nucleotide sequence around HMPREF1181_RS16950 or for all of scaffold NZ_KE340318

Other databases: NCBI

Nearby Genes

500 ntHMPREF1181_RS18030 and HMPREF1181_RS16930 are separated by 11 nucleotidesHMPREF1181_RS16930 and HMPREF1181_RS16935 are separated by 188 nucleotidesHMPREF1181_RS16935 and HMPREF1181_RS16940 are separated by 12 nucleotidesHMPREF1181_RS16940 and HMPREF1181_RS16945 are separated by 24 nucleotidesHMPREF1181_RS16945 and HMPREF1181_RS16950 are separated by 399 nucleotidesHMPREF1181_RS16950 and HMPREF1181_RS16955 are separated by 294 nucleotidesHMPREF1181_RS16955 and HMPREF1181_RS16960 are separated by 80 nucleotidesHMPREF1181_RS16960 and HMPREF1181_RS16965 are separated by 419 nucleotidesHMPREF1181_RS16965 and HMPREF1181_RS16970 are separated by 39 nucleotidesHMPREF1181_RS16970 and HMPREF1181_RS16975 are separated by 25 nucleotides HMPREF1181_RS18030: HMPREF1181_RS18030 - hypothetical protein, at 98,651 to 98,827 _RS18030 HMPREF1181_RS16930: HMPREF1181_RS16930 - BamA/TamA family outer membrane protein, at 98,839 to 100,041 _RS16930 HMPREF1181_RS16935: HMPREF1181_RS16935 - glycosyltransferase family 2 protein, at 100,230 to 101,420 _RS16935 HMPREF1181_RS16940: HMPREF1181_RS16940 - response regulator, at 101,433 to 104,150 _RS16940 HMPREF1181_RS16945: HMPREF1181_RS16945 - pyruvate carboxylase subunit B, at 104,175 to 105,950 _RS16945 HMPREF1181_RS16950: HMPREF1181_RS16950 - RNA polymerase sigma factor, at 106,350 to 106,853 _RS16950 HMPREF1181_RS16955: HMPREF1181_RS16955 - trimeric intracellular cation channel family protein, at 107,148 to 107,783 _RS16955 HMPREF1181_RS16960: HMPREF1181_RS16960 - UDP-N-acetyl glucosamine 2-epimerase, at 107,864 to 108,958 _RS16960 HMPREF1181_RS16965: HMPREF1181_RS16965 - carboxypeptidase-like regulatory domain-containing protein, at 109,378 to 111,963 _RS16965 HMPREF1181_RS16970: HMPREF1181_RS16970 - four helix bundle protein, at 112,003 to 112,368 _RS16970 HMPREF1181_RS16975: HMPREF1181_RS16975 - replication-associated recombination protein A, at 112,394 to 113,662 _RS16975
Locus Name Description Strand Phenotype
HMPREF1181_RS18030 HMPREF1181_RS18030 hypothetical protein - insig.
HMPREF1181_RS16930 HMPREF1181_RS16930 BamA/TamA family outer membrane protein + insig.
HMPREF1181_RS16935 HMPREF1181_RS16935 glycosyltransferase family 2 protein + sig.
HMPREF1181_RS16940 HMPREF1181_RS16940 response regulator + insig.
HMPREF1181_RS16945 HMPREF1181_RS16945 pyruvate carboxylase subunit B - strong
HMPREF1181_RS16950 HMPREF1181_RS16950 RNA polymerase sigma factor - strong
HMPREF1181_RS16955 HMPREF1181_RS16955 trimeric intracellular cation channel family protein - cofit
HMPREF1181_RS16960 HMPREF1181_RS16960 UDP-N-acetyl glucosamine 2-epimerase + no data
HMPREF1181_RS16965 HMPREF1181_RS16965 carboxypeptidase-like regulatory domain-containing protein + strong
HMPREF1181_RS16970 HMPREF1181_RS16970 four helix bundle protein + sig.
HMPREF1181_RS16975 HMPREF1181_RS16975 replication-associated recombination protein A + insig.

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