Gene info for HMPREF1181_RS12540 in Bacteroides stercoris CC31F

Annotation: long-chain fatty acid--CoA ligase
Type 1: Protein-coding gene
Located on scaffold NZ_KE340313, + strand, nucleotides 510,655 to 512,313
See nucleotide sequence around HMPREF1181_RS12540 or for all of scaffold NZ_KE340313

Other databases: NCBI

Nearby Genes

500 ntHMPREF1181_RS12515 and HMPREF1181_RS12520 overlap by 4 nucleotidesHMPREF1181_RS12520 and HMPREF1181_RS12525 are separated by 49 nucleotidesHMPREF1181_RS12525 and HMPREF1181_RS12530 are separated by 271 nucleotidesHMPREF1181_RS12530 and HMPREF1181_RS12535 are separated by 121 nucleotidesHMPREF1181_RS12535 and HMPREF1181_RS12540 are separated by 109 nucleotidesHMPREF1181_RS12540 and HMPREF1181_RS12545 are separated by 157 nucleotidesHMPREF1181_RS12545 and HMPREF1181_RS12550 are separated by 6 nucleotidesHMPREF1181_RS12550 and HMPREF1181_RS12555 are separated by 73 nucleotidesHMPREF1181_RS12555 and HMPREF1181_RS12560 are separated by 91 nucleotidesHMPREF1181_RS12560 and HMPREF1181_RS12565 are separated by 67 nucleotides HMPREF1181_RS12515: HMPREF1181_RS12515 - 6-phosphogluconolactonase, at 504,280 to 504,984 _RS12515 HMPREF1181_RS12520: HMPREF1181_RS12520 - glucose-6-phosphate dehydrogenase, at 504,981 to 506,477 _RS12520 HMPREF1181_RS12525: HMPREF1181_RS12525 - decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase, at 506,527 to 508,002 _RS12525 HMPREF1181_RS12530: HMPREF1181_RS12530 - GDP-mannose 4,6-dehydratase, at 508,274 to 509,350 _RS12530 HMPREF1181_RS12535: HMPREF1181_RS12535 - GDP-L-fucose synthase, at 509,472 to 510,545 _RS12535 HMPREF1181_RS12540: HMPREF1181_RS12540 - long-chain fatty acid--CoA ligase, at 510,655 to 512,313 _RS12540 HMPREF1181_RS12545: HMPREF1181_RS12545 - sulfatase, at 512,471 to 514,024 _RS12545 HMPREF1181_RS12550: HMPREF1181_RS12550 - hypothetical protein, at 514,031 to 515,206 _RS12550 HMPREF1181_RS12555: HMPREF1181_RS12555 - fructose-bisphosphatase class III, at 515,280 to 517,274 _RS12555 HMPREF1181_RS12560: HMPREF1181_RS12560 - putative transporter, at 517,366 to 519,030 _RS12560 HMPREF1181_RS12565: HMPREF1181_RS12565 - hypothetical protein, at 519,098 to 520,606 _RS12565
Locus Name Description Strand Phenotype
HMPREF1181_RS12515 HMPREF1181_RS12515 6-phosphogluconolactonase - strong
HMPREF1181_RS12520 HMPREF1181_RS12520 glucose-6-phosphate dehydrogenase - strong
HMPREF1181_RS12525 HMPREF1181_RS12525 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase - strong
HMPREF1181_RS12530 HMPREF1181_RS12530 GDP-mannose 4,6-dehydratase + strong
HMPREF1181_RS12535 HMPREF1181_RS12535 GDP-L-fucose synthase + strong
HMPREF1181_RS12540 HMPREF1181_RS12540 long-chain fatty acid--CoA ligase + strong
HMPREF1181_RS12545 HMPREF1181_RS12545 sulfatase + insig.
HMPREF1181_RS12550 HMPREF1181_RS12550 hypothetical protein + insig.
HMPREF1181_RS12555 HMPREF1181_RS12555 fructose-bisphosphatase class III - insig.
HMPREF1181_RS12560 HMPREF1181_RS12560 putative transporter - insig.
HMPREF1181_RS12565 HMPREF1181_RS12565 hypothetical protein + insig.

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