Gene info for HMPREF1181_RS10000 in Bacteroides stercoris CC31F

Annotation: SusD/RagB family nutrient-binding outer membrane lipoprotein
Type 1: Protein-coding gene
Located on scaffold NZ_KE340312, - strand, nucleotides 626,690 to 628,213
See nucleotide sequence around HMPREF1181_RS10000 or for all of scaffold NZ_KE340312

Other databases: NCBI

Nearby Genes

500 ntHMPREF1181_RS09975 and HMPREF1181_RS09980 overlap by 17 nucleotidesHMPREF1181_RS09980 and HMPREF1181_RS09985 are separated by 688 nucleotidesHMPREF1181_RS09985 and HMPREF1181_RS09990 are separated by 235 nucleotidesHMPREF1181_RS09990 and HMPREF1181_RS09995 are separated by 12 nucleotidesHMPREF1181_RS09995 and HMPREF1181_RS10000 are separated by 599 nucleotidesHMPREF1181_RS10000 and HMPREF1181_RS10005 are separated by 12 nucleotidesHMPREF1181_RS10005 and HMPREF1181_RS10010 are separated by 372 nucleotidesHMPREF1181_RS10010 and HMPREF1181_RS10015 are separated by 204 nucleotidesHMPREF1181_RS10015 and HMPREF1181_RS10020 are separated by 126 nucleotidesHMPREF1181_RS10020 and HMPREF1181_RS10025 are separated by 296 nucleotides HMPREF1181_RS09975: HMPREF1181_RS09975 - AAA family ATPase, at 618,585 to 620,630 _RS09975 HMPREF1181_RS09980: HMPREF1181_RS09980 - helix-turn-helix domain-containing protein, at 620,614 to 620,958 _RS09980 HMPREF1181_RS09985: HMPREF1181_RS09985 - site-specific integrase, at 621,647 to 622,870 _RS09985 HMPREF1181_RS09990: HMPREF1181_RS09990 - hypothetical protein, at 623,106 to 624,578 _RS09990 HMPREF1181_RS09995: HMPREF1181_RS09995 - hypothetical protein, at 624,591 to 626,090 _RS09995 HMPREF1181_RS10000: HMPREF1181_RS10000 - SusD/RagB family nutrient-binding outer membrane lipoprotein, at 626,690 to 628,213 _RS10000 HMPREF1181_RS10005: HMPREF1181_RS10005 - SusC/RagA family TonB-linked outer membrane protein, at 628,226 to 631,528 _RS10005 HMPREF1181_RS10010: HMPREF1181_RS10010 - FecR domain-containing protein, at 631,901 to 632,881 _RS10010 HMPREF1181_RS10015: HMPREF1181_RS10015 - hypothetical protein, at 633,086 to 634,873 _RS10015 HMPREF1181_RS10020: HMPREF1181_RS10020 - RNA polymerase sigma-70 factor, at 635,000 to 635,605 _RS10020 HMPREF1181_RS10025: HMPREF1181_RS10025 - leucine-rich repeat protein, at 635,902 to 637,521 _RS10025
Locus Name Description Strand Phenotype
HMPREF1181_RS09975 HMPREF1181_RS09975 AAA family ATPase - insig.
HMPREF1181_RS09980 HMPREF1181_RS09980 helix-turn-helix domain-containing protein - insig.
HMPREF1181_RS09985 HMPREF1181_RS09985 site-specific integrase + insig.
HMPREF1181_RS09990 HMPREF1181_RS09990 hypothetical protein - cofit
HMPREF1181_RS09995 HMPREF1181_RS09995 hypothetical protein - insig.
HMPREF1181_RS10000 HMPREF1181_RS10000 SusD/RagB family nutrient-binding outer membrane lipoprotein - insig.
HMPREF1181_RS10005 HMPREF1181_RS10005 SusC/RagA family TonB-linked outer membrane protein - insig.
HMPREF1181_RS10010 HMPREF1181_RS10010 FecR domain-containing protein - insig.
HMPREF1181_RS10015 HMPREF1181_RS10015 hypothetical protein - insig.
HMPREF1181_RS10020 HMPREF1181_RS10020 RNA polymerase sigma-70 factor - cofit
HMPREF1181_RS10025 HMPREF1181_RS10025 leucine-rich repeat protein - insig.

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