Gene info for HMPREF1181_RS08980 in Bacteroides stercoris CC31F

Annotation: 1-deoxy-D-xylulose-5-phosphate synthase
Type 1: Protein-coding gene
Located on scaffold NZ_KE340312, + strand, nucleotides 396,559 to 398,466
See nucleotide sequence around HMPREF1181_RS08980 or for all of scaffold NZ_KE340312

Other databases: NCBI

Nearby Genes

500 ntHMPREF1181_RS08955 and HMPREF1181_RS08960 overlap by 4 nucleotidesHMPREF1181_RS08960 and HMPREF1181_RS08965 are separated by 77 nucleotidesHMPREF1181_RS08965 and HMPREF1181_RS08970 are separated by 128 nucleotidesHMPREF1181_RS08970 and HMPREF1181_RS08975 overlap by 25 nucleotidesHMPREF1181_RS08975 and HMPREF1181_RS08980 are separated by 410 nucleotidesHMPREF1181_RS08980 and HMPREF1181_RS08985 are separated by 78 nucleotidesHMPREF1181_RS08985 and HMPREF1181_RS08990 are separated by 88 nucleotidesHMPREF1181_RS08990 and HMPREF1181_RS08995 are separated by 125 nucleotidesHMPREF1181_RS08995 and HMPREF1181_RS09000 are separated by 98 nucleotidesHMPREF1181_RS09000 and HMPREF1181_RS09005 overlap by 10 nucleotides HMPREF1181_RS08955: HMPREF1181_RS08955 - AAA family ATPase, at 387,987 to 391,409 _RS08955 HMPREF1181_RS08960: HMPREF1181_RS08960 - twin-arginine translocase subunit TatC, at 391,406 to 392,230 _RS08960 HMPREF1181_RS08965: HMPREF1181_RS08965 - twin-arginine translocase TatA/TatE family subunit, at 392,308 to 392,523 _RS08965 HMPREF1181_RS08970: HMPREF1181_RS08970 - bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase, at 392,652 to 395,183 _RS08970 HMPREF1181_RS08975: HMPREF1181_RS08975 - GSCFA domain-containing protein, at 395,159 to 396,148 _RS08975 HMPREF1181_RS08980: HMPREF1181_RS08980 - 1-deoxy-D-xylulose-5-phosphate synthase, at 396,559 to 398,466 _RS08980 HMPREF1181_RS08985: HMPREF1181_RS08985 - Trk system potassium transporter TrkA, at 398,545 to 399,885 _RS08985 HMPREF1181_RS08990: HMPREF1181_RS08990 - TrkH family potassium uptake protein, at 399,974 to 401,425 _RS08990 HMPREF1181_RS08995: HMPREF1181_RS08995 - hypothetical protein, at 401,551 to 401,898 _RS08995 HMPREF1181_RS09000: HMPREF1181_RS09000 - NADH-quinone oxidoreductase subunit A, at 401,997 to 402,347 _RS09000 HMPREF1181_RS09005: HMPREF1181_RS09005 - NADH-quinone oxidoreductase subunit B, at 402,338 to 402,925 _RS09005
Locus Name Description Strand Phenotype
HMPREF1181_RS08955 HMPREF1181_RS08955 AAA family ATPase - insig.
HMPREF1181_RS08960 HMPREF1181_RS08960 twin-arginine translocase subunit TatC - insig.
HMPREF1181_RS08965 HMPREF1181_RS08965 twin-arginine translocase TatA/TatE family subunit - insig.
HMPREF1181_RS08970 HMPREF1181_RS08970 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase - no data
HMPREF1181_RS08975 HMPREF1181_RS08975 GSCFA domain-containing protein - sig.
HMPREF1181_RS08980 HMPREF1181_RS08980 1-deoxy-D-xylulose-5-phosphate synthase + no data
HMPREF1181_RS08985 HMPREF1181_RS08985 Trk system potassium transporter TrkA + strong
HMPREF1181_RS08990 HMPREF1181_RS08990 TrkH family potassium uptake protein + strong
HMPREF1181_RS08995 HMPREF1181_RS08995 hypothetical protein + sig.
HMPREF1181_RS09000 HMPREF1181_RS09000 NADH-quinone oxidoreductase subunit A + sig.
HMPREF1181_RS09005 HMPREF1181_RS09005 NADH-quinone oxidoreductase subunit B + sig.

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