Gene info for HMPREF1181_RS08945 in Bacteroides stercoris CC31F

Annotation: 5-dehydro-4-deoxy-D-glucuronate isomerase
Type 1: Protein-coding gene
Located on scaffold NZ_KE340312, + strand, nucleotides 385,109 to 386,065
See nucleotide sequence around HMPREF1181_RS08945 or for all of scaffold NZ_KE340312

Other databases: NCBI

Nearby Genes

500 ntHMPREF1181_RS08920 and HMPREF1181_RS08925 are separated by 59 nucleotidesHMPREF1181_RS08925 and HMPREF1181_RS08930 are separated by 7 nucleotidesHMPREF1181_RS08930 and HMPREF1181_RS08935 are separated by 14 nucleotidesHMPREF1181_RS08935 and HMPREF1181_RS08940 are separated by 292 nucleotidesHMPREF1181_RS08940 and HMPREF1181_RS08945 are separated by 45 nucleotidesHMPREF1181_RS08945 and HMPREF1181_RS08950 are separated by 142 nucleotidesHMPREF1181_RS08950 and HMPREF1181_RS08955 are separated by 315 nucleotidesHMPREF1181_RS08955 and HMPREF1181_RS08960 overlap by 4 nucleotidesHMPREF1181_RS08960 and HMPREF1181_RS08965 are separated by 77 nucleotidesHMPREF1181_RS08965 and HMPREF1181_RS08970 are separated by 128 nucleotides HMPREF1181_RS08920: HMPREF1181_RS08920 - pectinesterase, at 379,025 to 380,791 _RS08920 HMPREF1181_RS08925: HMPREF1181_RS08925 - cupin domain-containing protein, at 380,851 to 381,198 _RS08925 HMPREF1181_RS08930: HMPREF1181_RS08930 - pectinesterase, at 381,206 to 382,159 _RS08930 HMPREF1181_RS08935: HMPREF1181_RS08935 - glycoside hydrolase family 88 protein, at 382,174 to 383,397 _RS08935 HMPREF1181_RS08940: HMPREF1181_RS08940 - PTS sugar transporter subunit IIC, at 383,690 to 385,063 _RS08940 HMPREF1181_RS08945: HMPREF1181_RS08945 - 5-dehydro-4-deoxy-D-glucuronate isomerase, at 385,109 to 386,065 _RS08945 HMPREF1181_RS08950: HMPREF1181_RS08950 - MFS transporter, at 386,208 to 387,671 _RS08950 HMPREF1181_RS08955: HMPREF1181_RS08955 - AAA family ATPase, at 387,987 to 391,409 _RS08955 HMPREF1181_RS08960: HMPREF1181_RS08960 - twin-arginine translocase subunit TatC, at 391,406 to 392,230 _RS08960 HMPREF1181_RS08965: HMPREF1181_RS08965 - twin-arginine translocase TatA/TatE family subunit, at 392,308 to 392,523 _RS08965 HMPREF1181_RS08970: HMPREF1181_RS08970 - bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase, at 392,652 to 395,183 _RS08970
Locus Name Description Strand Phenotype
HMPREF1181_RS08920 HMPREF1181_RS08920 pectinesterase - insig.
HMPREF1181_RS08925 HMPREF1181_RS08925 cupin domain-containing protein + insig.
HMPREF1181_RS08930 HMPREF1181_RS08930 pectinesterase - sig.
HMPREF1181_RS08935 HMPREF1181_RS08935 glycoside hydrolase family 88 protein - strong
HMPREF1181_RS08940 HMPREF1181_RS08940 PTS sugar transporter subunit IIC + strong
HMPREF1181_RS08945 HMPREF1181_RS08945 5-dehydro-4-deoxy-D-glucuronate isomerase + strong
HMPREF1181_RS08950 HMPREF1181_RS08950 MFS transporter + strong
HMPREF1181_RS08955 HMPREF1181_RS08955 AAA family ATPase - insig.
HMPREF1181_RS08960 HMPREF1181_RS08960 twin-arginine translocase subunit TatC - insig.
HMPREF1181_RS08965 HMPREF1181_RS08965 twin-arginine translocase TatA/TatE family subunit - insig.
HMPREF1181_RS08970 HMPREF1181_RS08970 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase - no data

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