Gene info for HMPREF1181_RS08880 in Bacteroides stercoris CC31F

Annotation: RagB/SusD family nutrient uptake outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_KE340312, + strand, nucleotides 359,349 to 361,136
See nucleotide sequence around HMPREF1181_RS08880 or for all of scaffold NZ_KE340312

Other databases: NCBI

Nearby Genes

500 ntHMPREF1181_RS08850 and HMPREF1181_RS08855 are separated by 103 nucleotidesHMPREF1181_RS08855 and HMPREF1181_RS08860 are separated by 140 nucleotidesHMPREF1181_RS08860 and HMPREF1181_RS08870 are separated by 332 nucleotidesHMPREF1181_RS08870 and HMPREF1181_RS08875 are separated by 259 nucleotidesHMPREF1181_RS08875 and HMPREF1181_RS08880 are separated by 21 nucleotidesHMPREF1181_RS08880 and HMPREF1181_RS08885 are separated by 274 nucleotidesHMPREF1181_RS08885 and HMPREF1181_RS08890 are separated by 77 nucleotidesHMPREF1181_RS08890 and HMPREF1181_RS08895 are separated by 20 nucleotidesHMPREF1181_RS08895 and HMPREF1181_RS08900 are separated by 108 nucleotidesHMPREF1181_RS08900 and HMPREF1181_RS08905 are separated by 14 nucleotides HMPREF1181_RS08850: HMPREF1181_RS08850 - DUF5123 domain-containing protein, at 350,304 to 352,109 _RS08850 HMPREF1181_RS08855: HMPREF1181_RS08855 - DUF1593 domain-containing protein, at 352,213 to 353,514 _RS08855 HMPREF1181_RS08860: HMPREF1181_RS08860 - HU family DNA-binding protein, at 353,655 to 354,293 _RS08860 HMPREF1181_RS08870: HMPREF1181_RS08870 - DUF3874 domain-containing protein, at 354,626 to 355,843 _RS08870 HMPREF1181_RS08875: HMPREF1181_RS08875 - TonB-dependent receptor, at 356,103 to 359,327 _RS08875 HMPREF1181_RS08880: HMPREF1181_RS08880 - RagB/SusD family nutrient uptake outer membrane protein, at 359,349 to 361,136 _RS08880 HMPREF1181_RS08885: HMPREF1181_RS08885 - response regulator, at 361,411 to 365,883 _RS08885 HMPREF1181_RS08890: HMPREF1181_RS08890 - dienelactone hydrolase family protein, at 365,961 to 367,118 _RS08890 HMPREF1181_RS08895: HMPREF1181_RS08895 - response regulator, at 367,139 to 371,560 _RS08895 HMPREF1181_RS08900: HMPREF1181_RS08900 - dienelactone hydrolase family protein, at 371,669 to 372,811 _RS08900 HMPREF1181_RS08905: HMPREF1181_RS08905 - RagB/SusD family nutrient uptake outer membrane protein, at 372,826 to 374,358 _RS08905
Locus Name Description Strand Phenotype
HMPREF1181_RS08850 HMPREF1181_RS08850 DUF5123 domain-containing protein + sig.
HMPREF1181_RS08855 HMPREF1181_RS08855 DUF1593 domain-containing protein + insig.
HMPREF1181_RS08860 HMPREF1181_RS08860 HU family DNA-binding protein - insig.
HMPREF1181_RS08870 HMPREF1181_RS08870 DUF3874 domain-containing protein + cofit
HMPREF1181_RS08875 HMPREF1181_RS08875 TonB-dependent receptor + strong
HMPREF1181_RS08880 HMPREF1181_RS08880 RagB/SusD family nutrient uptake outer membrane protein + strong
HMPREF1181_RS08885 HMPREF1181_RS08885 response regulator - strong
HMPREF1181_RS08890 HMPREF1181_RS08890 dienelactone hydrolase family protein + cofit
HMPREF1181_RS08895 HMPREF1181_RS08895 response regulator + insig.
HMPREF1181_RS08900 HMPREF1181_RS08900 dienelactone hydrolase family protein - insig.
HMPREF1181_RS08905 HMPREF1181_RS08905 RagB/SusD family nutrient uptake outer membrane protein - insig.

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