Gene info for HMPREF1181_RS08100 in Bacteroides stercoris CC31F

Annotation: rRNA cytosine-C5-methyltransferase
Type 1: Protein-coding gene
Located on scaffold NZ_KE340312, - strand, nucleotides 135,058 to 136,536
See nucleotide sequence around HMPREF1181_RS08100 or for all of scaffold NZ_KE340312

Other databases: NCBI

Nearby Genes

500 ntHMPREF1181_RS08075 and HMPREF1181_RS08080 are separated by 62 nucleotidesHMPREF1181_RS08080 and HMPREF1181_RS08085 are separated by 113 nucleotidesHMPREF1181_RS08085 and HMPREF1181_RS08090 are separated by 11 nucleotidesHMPREF1181_RS08090 and HMPREF1181_RS08095 are separated by 57 nucleotidesHMPREF1181_RS08095 and HMPREF1181_RS08100 are separated by 16 nucleotidesHMPREF1181_RS08100 and HMPREF1181_RS08105 are separated by 146 nucleotidesHMPREF1181_RS08105 and HMPREF1181_RS08110 overlap by 4 nucleotidesHMPREF1181_RS08110 and HMPREF1181_RS08115 overlap by 17 nucleotidesHMPREF1181_RS08115 and HMPREF1181_RS18080 are separated by 375 nucleotidesHMPREF1181_RS18080 and HMPREF1181_RS08120 are separated by 77 nucleotides HMPREF1181_RS08075: HMPREF1181_RS08075 - FAD-dependent oxidoreductase, at 127,407 to 128,786 _RS08075 HMPREF1181_RS08080: HMPREF1181_RS08080 - hypothetical protein, at 128,849 to 129,256 _RS08080 HMPREF1181_RS08085: HMPREF1181_RS08085 - efflux RND transporter periplasmic adaptor subunit, at 129,370 to 130,596 _RS08085 HMPREF1181_RS08090: HMPREF1181_RS08090 - CusA/CzcA family heavy metal efflux RND transporter, at 130,608 to 133,754 _RS08090 HMPREF1181_RS08095: HMPREF1181_RS08095 - TolC family protein, at 133,812 to 135,041 _RS08095 HMPREF1181_RS08100: HMPREF1181_RS08100 - rRNA cytosine-C5-methyltransferase, at 135,058 to 136,536 _RS08100 HMPREF1181_RS08105: HMPREF1181_RS08105 - hypothetical protein, at 136,683 to 137,366 _RS08105 HMPREF1181_RS08110: HMPREF1181_RS08110 - sigma-70 family RNA polymerase sigma factor, at 137,363 to 137,911 _RS08110 HMPREF1181_RS08115: HMPREF1181_RS08115 - DUF5056 domain-containing protein, at 137,895 to 138,221 _RS08115 HMPREF1181_RS18080: HMPREF1181_RS18080 - hypothetical protein, at 138,597 to 138,887 _RS18080 HMPREF1181_RS08120: HMPREF1181_RS08120 - helix-turn-helix domain-containing protein, at 138,965 to 139,276 _RS08120
Locus Name Description Strand Phenotype
HMPREF1181_RS08075 HMPREF1181_RS08075 FAD-dependent oxidoreductase + insig.
HMPREF1181_RS08080 HMPREF1181_RS08080 hypothetical protein + insig.
HMPREF1181_RS08085 HMPREF1181_RS08085 efflux RND transporter periplasmic adaptor subunit + cofit
HMPREF1181_RS08090 HMPREF1181_RS08090 CusA/CzcA family heavy metal efflux RND transporter + cofit
HMPREF1181_RS08095 HMPREF1181_RS08095 TolC family protein + sig.
HMPREF1181_RS08100 HMPREF1181_RS08100 rRNA cytosine-C5-methyltransferase - insig.
HMPREF1181_RS08105 HMPREF1181_RS08105 hypothetical protein + insig.
HMPREF1181_RS08110 HMPREF1181_RS08110 sigma-70 family RNA polymerase sigma factor + insig.
HMPREF1181_RS08115 HMPREF1181_RS08115 DUF5056 domain-containing protein + strong
HMPREF1181_RS18080 HMPREF1181_RS18080 hypothetical protein - insig.
HMPREF1181_RS08120 HMPREF1181_RS08120 helix-turn-helix domain-containing protein - insig.

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