Gene info for HMPREF1181_RS05700 in Bacteroides stercoris CC31F

Annotation: RagB/SusD family nutrient uptake outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_KE340311, + strand, nucleotides 458,043 to 459,731
See nucleotide sequence around HMPREF1181_RS05700 or for all of scaffold NZ_KE340311

Other databases: NCBI

Nearby Genes

500 ntHMPREF1181_RS05670 and HMPREF1181_RS05675 are separated by 48 nucleotidesHMPREF1181_RS05675 and HMPREF1181_RS05680 are separated by 54 nucleotidesHMPREF1181_RS05680 and HMPREF1181_RS05685 are separated by 13 nucleotidesHMPREF1181_RS05685 and HMPREF1181_RS05695 are separated by 307 nucleotidesHMPREF1181_RS05695 and HMPREF1181_RS05700 are separated by 23 nucleotidesHMPREF1181_RS05700 and HMPREF1181_RS05705 are separated by 14 nucleotidesHMPREF1181_RS05705 and HMPREF1181_RS05710 are separated by 11 nucleotidesHMPREF1181_RS05710 and HMPREF1181_RS05715 are separated by 167 nucleotidesHMPREF1181_RS05715 and HMPREF1181_RS05720 are separated by 321 nucleotidesHMPREF1181_RS05720 and HMPREF1181_RS05725 are separated by 126 nucleotides HMPREF1181_RS05670: HMPREF1181_RS05670 - substrate-binding domain-containing protein, at 447,860 to 450,598 _RS05670 HMPREF1181_RS05675: HMPREF1181_RS05675 - carbohydrate kinase, at 450,647 to 451,531 _RS05675 HMPREF1181_RS05680: HMPREF1181_RS05680 - MFS transporter, at 451,586 to 452,749 _RS05680 HMPREF1181_RS05685: HMPREF1181_RS05685 - DUF4980 domain-containing protein, at 452,763 to 454,619 _RS05685 HMPREF1181_RS05695: HMPREF1181_RS05695 - TonB-dependent receptor, at 454,927 to 458,019 _RS05695 HMPREF1181_RS05700: HMPREF1181_RS05700 - RagB/SusD family nutrient uptake outer membrane protein, at 458,043 to 459,731 _RS05700 HMPREF1181_RS05705: HMPREF1181_RS05705 - DUF4960 domain-containing protein, at 459,746 to 461,143 _RS05705 HMPREF1181_RS05710: HMPREF1181_RS05710 - glycoside hydrolase family 32 protein, at 461,155 to 462,687 _RS05710 HMPREF1181_RS05715: HMPREF1181_RS05715 - IS1595 family transposase, at 462,855 to 463,583 _RS05715 HMPREF1181_RS05720: HMPREF1181_RS05720 - glycoside hydrolase family 3 C-terminal domain-containing protein, at 463,905 to 466,739 _RS05720 HMPREF1181_RS05725: HMPREF1181_RS05725 - DUF4831 family protein, at 466,866 to 467,918 _RS05725
Locus Name Description Strand Phenotype
HMPREF1181_RS05670 HMPREF1181_RS05670 substrate-binding domain-containing protein - strong
HMPREF1181_RS05675 HMPREF1181_RS05675 carbohydrate kinase - strong
HMPREF1181_RS05680 HMPREF1181_RS05680 MFS transporter - strong
HMPREF1181_RS05685 HMPREF1181_RS05685 DUF4980 domain-containing protein - strong
HMPREF1181_RS05695 HMPREF1181_RS05695 TonB-dependent receptor + strong
HMPREF1181_RS05700 HMPREF1181_RS05700 RagB/SusD family nutrient uptake outer membrane protein + strong
HMPREF1181_RS05705 HMPREF1181_RS05705 DUF4960 domain-containing protein + sig.
HMPREF1181_RS05710 HMPREF1181_RS05710 glycoside hydrolase family 32 protein + insig.
HMPREF1181_RS05715 HMPREF1181_RS05715 IS1595 family transposase - insig.
HMPREF1181_RS05720 HMPREF1181_RS05720 glycoside hydrolase family 3 C-terminal domain-containing protein + insig.
HMPREF1181_RS05725 HMPREF1181_RS05725 DUF4831 family protein + strong

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