Gene info for HMPREF1181_RS01640 in Bacteroides stercoris CC31F

Annotation: tyrosine--tRNA ligase
Type 1: Protein-coding gene
Located on scaffold NZ_KE340309, - strand, nucleotides 396,236 to 397,528
See nucleotide sequence around HMPREF1181_RS01640 or for all of scaffold NZ_KE340309

Other databases: NCBI

Nearby Genes

500 ntHMPREF1181_RS01615 and HMPREF1181_RS01620 are separated by 80 nucleotidesHMPREF1181_RS01620 and HMPREF1181_RS01625 are separated by 143 nucleotidesHMPREF1181_RS01625 and HMPREF1181_RS01630 are separated by 33 nucleotidesHMPREF1181_RS01630 and HMPREF1181_RS01635 are separated by 338 nucleotidesHMPREF1181_RS01635 and HMPREF1181_RS01640 are separated by 92 nucleotidesHMPREF1181_RS01640 and HMPREF1181_RS01645 are separated by 78 nucleotidesHMPREF1181_RS01645 and HMPREF1181_RS01650 overlap by 4 nucleotidesHMPREF1181_RS01650 and HMPREF1181_RS01655 overlap by 4 nucleotidesHMPREF1181_RS01655 and HMPREF1181_RS01660 are separated by 164 nucleotidesHMPREF1181_RS01660 and HMPREF1181_RS01665 are separated by 4 nucleotides HMPREF1181_RS01615: HMPREF1181_RS01615 - polysaccharide deacetylase family protein, at 391,984 to 392,598 _RS01615 HMPREF1181_RS01620: HMPREF1181_RS01620 - DUF4861 domain-containing protein, at 392,679 to 393,911 _RS01620 HMPREF1181_RS01625: HMPREF1181_RS01625 - gluconate 5-dehydrogenase, at 394,055 to 394,858 _RS01625 HMPREF1181_RS01630: HMPREF1181_RS01630 - 5-dehydro-4-deoxy-D-glucuronate isomerase, at 394,892 to 395,734 _RS01630 HMPREF1181_RS01635: HMPREF1181_RS01635 - tRNA-Gln, at 396,073 to 396,143 _RS01635 HMPREF1181_RS01640: HMPREF1181_RS01640 - tyrosine--tRNA ligase, at 396,236 to 397,528 _RS01640 HMPREF1181_RS01645: HMPREF1181_RS01645 - TatD family hydrolase, at 397,607 to 398,254 _RS01645 HMPREF1181_RS01650: HMPREF1181_RS01650 - membrane protein insertion efficiency factor YidD, at 398,251 to 398,472 _RS01650 HMPREF1181_RS01655: HMPREF1181_RS01655 - ribonuclease P protein component, at 398,469 to 398,891 _RS01655 HMPREF1181_RS01660: HMPREF1181_RS01660 - uroporphyrinogen-III synthase, at 399,056 to 399,808 _RS01660 HMPREF1181_RS01665: HMPREF1181_RS01665 - DUF4271 domain-containing protein, at 399,813 to 400,544 _RS01665
Locus Name Description Strand Phenotype
HMPREF1181_RS01615 HMPREF1181_RS01615 polysaccharide deacetylase family protein + strong
HMPREF1181_RS01620 HMPREF1181_RS01620 DUF4861 domain-containing protein - cofit
HMPREF1181_RS01625 HMPREF1181_RS01625 gluconate 5-dehydrogenase - strong
HMPREF1181_RS01630 HMPREF1181_RS01630 5-dehydro-4-deoxy-D-glucuronate isomerase - insig.
HMPREF1181_RS01635 HMPREF1181_RS01635 tRNA-Gln - no data
HMPREF1181_RS01640 HMPREF1181_RS01640 tyrosine--tRNA ligase - no data
HMPREF1181_RS01645 HMPREF1181_RS01645 TatD family hydrolase - insig.
HMPREF1181_RS01650 HMPREF1181_RS01650 membrane protein insertion efficiency factor YidD - insig.
HMPREF1181_RS01655 HMPREF1181_RS01655 ribonuclease P protein component - no data
HMPREF1181_RS01660 HMPREF1181_RS01660 uroporphyrinogen-III synthase - no data
HMPREF1181_RS01665 HMPREF1181_RS01665 DUF4271 domain-containing protein - strong

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