Gene info for HGI48_RS20385 in Dickeya dianthicola 67-19

Annotation: tRNA (uridine(54)-C5)-methyltransferase TrmA
Type 1: Protein-coding gene
Located on scaffold NZ_CP051429, + strand, nucleotides 4,557,203 to 4,558,306
See nucleotide sequence around HGI48_RS20385 or for all of scaffold NZ_CP051429

Other databases: NCBI, uniprot: A0A7L9RIF2

Nearby Genes

500 ntHGI48_RS20360 and HGI48_RS20365 are separated by 112 nucleotidesHGI48_RS20365 and HGI48_RS20370 are separated by 69 nucleotidesHGI48_RS20370 and HGI48_RS20375 are separated by 345 nucleotidesHGI48_RS20375 and HGI48_RS20380 overlap by 56 nucleotidesHGI48_RS20380 and HGI48_RS20385 are separated by 414 nucleotidesHGI48_RS20385 and HGI48_RS20390 are separated by 12 nucleotidesHGI48_RS20390 and HGI48_RS20395 are separated by 14 nucleotidesHGI48_RS20395 and HGI48_RS20400 are separated by 207 nucleotidesHGI48_RS20400 and HGI48_RS20405 are separated by 67 nucleotidesHGI48_RS20405 and HGI48_RS20410 are separated by 161 nucleotides HGI48_RS20360: HGI48_RS20360 - tRNA-Ala, at 4,551,867 to 4,551,942 _RS20360 HGI48_RS20365: HGI48_RS20365 - tRNA-Ile, at 4,552,055 to 4,552,131 _RS20365 HGI48_RS20370: HGI48_RS20370 - 16S ribosomal RNA, at 4,552,201 to 4,553,745 _RS20370 HGI48_RS20375: HGI48_RS20375 - glutamate racemase, at 4,554,091 to 4,554,963 _RS20375 HGI48_RS20380: HGI48_RS20380 - TonB-dependent vitamin B12 receptor BtuB, at 4,554,908 to 4,556,788 _RS20380 HGI48_RS20385: HGI48_RS20385 - tRNA (uridine(54)-C5)-methyltransferase TrmA, at 4,557,203 to 4,558,306 _RS20385 HGI48_RS20390: HGI48_RS20390 - YijD family membrane protein, at 4,558,319 to 4,558,693 _RS20390 HGI48_RS20395: HGI48_RS20395 - HTH-type transcriptional repressor FabR, at 4,558,708 to 4,559,346 _RS20395 HGI48_RS20400: HGI48_RS20400 - Si-specific NAD(P)(+) transhydrogenase, at 4,559,554 to 4,560,954 _RS20400 HGI48_RS20405: HGI48_RS20405 - DNA-binding transcriptional regulator OxyR, at 4,561,022 to 4,561,939 _RS20405 HGI48_RS20410: HGI48_RS20410 - glutathione peroxidase, at 4,562,101 to 4,562,832 _RS20410
Locus Name Description Strand Phenotype
HGI48_RS20360 HGI48_RS20360 tRNA-Ala - no data
HGI48_RS20365 HGI48_RS20365 tRNA-Ile - no data
HGI48_RS20370 HGI48_RS20370 16S ribosomal RNA - no data
HGI48_RS20375 HGI48_RS20375 glutamate racemase - strong
HGI48_RS20380 HGI48_RS20380 TonB-dependent vitamin B12 receptor BtuB - insig.
HGI48_RS20385 HGI48_RS20385 tRNA (uridine(54)-C5)-methyltransferase TrmA + insig.
HGI48_RS20390 HGI48_RS20390 YijD family membrane protein - insig.
HGI48_RS20395 HGI48_RS20395 HTH-type transcriptional repressor FabR - cofit
HGI48_RS20400 HGI48_RS20400 Si-specific NAD(P)(+) transhydrogenase + insig.
HGI48_RS20405 HGI48_RS20405 DNA-binding transcriptional regulator OxyR - strong
HGI48_RS20410 HGI48_RS20410 glutathione peroxidase + insig.

Or browse nearby genes

Or see the comparative fitness browser