Gene info for HGI48_RS18560 in Dickeya dianthicola 67-19

Annotation: N-acetylmuramoyl-L-alanine amidase AmiB
Type 1: Protein-coding gene
Located on scaffold NZ_CP051429, - strand, nucleotides 4,165,577 to 4,167,250
See nucleotide sequence around HGI48_RS18560 or for all of scaffold NZ_CP051429

Other databases: NCBI, uniprot: A0A7L9RHH3

Nearby Genes

500 ntHGI48_RS18535 and HGI48_RS18540 are separated by 72 nucleotidesHGI48_RS18540 and HGI48_RS18545 are separated by 89 nucleotidesHGI48_RS18545 and HGI48_RS18550 are separated by 144 nucleotidesHGI48_RS18550 and HGI48_RS18555 overlap by 8 nucleotidesHGI48_RS18555 and HGI48_RS18560 are separated by 27 nucleotidesHGI48_RS18560 and HGI48_RS18565 overlap by 4 nucleotidesHGI48_RS18565 and HGI48_RS18570 overlap by 4 nucleotidesHGI48_RS18570 and HGI48_RS18575 are separated by 174 nucleotidesHGI48_RS18575 and HGI48_RS18580 are separated by 283 nucleotidesHGI48_RS18580 and HGI48_RS18585 are separated by 647 nucleotides HGI48_RS18535: HGI48_RS18535 - FtsH protease activity modulator HflK, at 4,159,535 to 4,160,800 _RS18535 HGI48_RS18540: HGI48_RS18540 - GTPase HflX, at 4,160,873 to 4,162,153 _RS18540 HGI48_RS18545: HGI48_RS18545 - RNA chaperone Hfq, at 4,162,243 to 4,162,542 _RS18545 HGI48_RS18550: HGI48_RS18550 - tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA, at 4,162,687 to 4,163,628 _RS18550 HGI48_RS18555: HGI48_RS18555 - DNA mismatch repair endonuclease MutL, at 4,163,621 to 4,165,549 _RS18555 HGI48_RS18560: HGI48_RS18560 - N-acetylmuramoyl-L-alanine amidase AmiB, at 4,165,577 to 4,167,250 _RS18560 HGI48_RS18565: HGI48_RS18565 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE, at 4,167,247 to 4,167,729 _RS18565 HGI48_RS18570: HGI48_RS18570 - bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase, at 4,167,726 to 4,169,267 _RS18570 HGI48_RS18575: HGI48_RS18575 - tRNA epoxyqueuosine(34) reductase QueG, at 4,169,442 to 4,170,596 _RS18575 HGI48_RS18580: HGI48_RS18580 - tRNA-Gly, at 4,170,880 to 4,170,955 _RS18580 HGI48_RS18585: HGI48_RS18585 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, at 4,171,603 to 4,173,000 _RS18585
Locus Name Description Strand Phenotype
HGI48_RS18535 HGI48_RS18535 FtsH protease activity modulator HflK - cofit
HGI48_RS18540 HGI48_RS18540 GTPase HflX - insig.
HGI48_RS18545 HGI48_RS18545 RNA chaperone Hfq - strong
HGI48_RS18550 HGI48_RS18550 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA - strong
HGI48_RS18555 HGI48_RS18555 DNA mismatch repair endonuclease MutL - insig.
HGI48_RS18560 HGI48_RS18560 N-acetylmuramoyl-L-alanine amidase AmiB - insig.
HGI48_RS18565 HGI48_RS18565 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE - no data
HGI48_RS18570 HGI48_RS18570 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase - insig.
HGI48_RS18575 HGI48_RS18575 tRNA epoxyqueuosine(34) reductase QueG + insig.
HGI48_RS18580 HGI48_RS18580 tRNA-Gly - no data
HGI48_RS18585 HGI48_RS18585 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase + strong

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