Gene info for HGI48_RS16940 in Dickeya dianthicola 67-19

Annotation: proline--tRNA ligase
Type 1: Protein-coding gene
Located on scaffold NZ_CP051429, + strand, nucleotides 3,789,484 to 3,791,202
See nucleotide sequence around HGI48_RS16940 or for all of scaffold NZ_CP051429

Other databases: NCBI, uniprot: A0A7L9RGL2

Nearby Genes

500 ntHGI48_RS16915 and HGI48_RS16920 overlap by 8 nucleotidesHGI48_RS16920 and HGI48_RS16925 are separated by 71 nucleotidesHGI48_RS16925 and HGI48_RS16930 are separated by 114 nucleotidesHGI48_RS16930 and HGI48_RS16935 overlap by 4 nucleotidesHGI48_RS16935 and HGI48_RS16940 are separated by 115 nucleotidesHGI48_RS16940 and HGI48_RS16945 are separated by 81 nucleotidesHGI48_RS16945 and HGI48_RS16950 are separated by 53 nucleotidesHGI48_RS16950 and HGI48_RS16955 are separated by 306 nucleotidesHGI48_RS16955 and HGI48_RS16960 are separated by 121 nucleotidesHGI48_RS16960 and HGI48_RS16965 overlap by 7 nucleotides HGI48_RS16915: HGI48_RS16915 - methionine ABC transporter ATP-binding protein MetN, at 3,785,578 to 3,786,609 _RS16915 HGI48_RS16920: HGI48_RS16920 - methionine ABC transporter permease MetI, at 3,786,602 to 3,787,255 _RS16920 HGI48_RS16925: HGI48_RS16925 - MetQ/NlpA family lipoprotein, at 3,787,327 to 3,788,142 _RS16925 HGI48_RS16930: HGI48_RS16930 - Rcs stress response system protein RcsF, at 3,788,257 to 3,788,664 _RS16930 HGI48_RS16935: HGI48_RS16935 - tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO, at 3,788,661 to 3,789,368 _RS16935 HGI48_RS16940: HGI48_RS16940 - proline--tRNA ligase, at 3,789,484 to 3,791,202 _RS16940 HGI48_RS16945: HGI48_RS16945 - RNA polymerase sigma factor RpoS, at 3,791,284 to 3,792,276 _RS16945 HGI48_RS16950: HGI48_RS16950 - murein hydrolase activator NlpD, at 3,792,330 to 3,793,556 _RS16950 HGI48_RS16955: HGI48_RS16955 - protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 3,793,863 to 3,794,489 _RS16955 HGI48_RS16960: HGI48_RS16960 - tRNA pseudouridine(13) synthase TruD, at 3,794,611 to 3,795,660 _RS16960 HGI48_RS16965: HGI48_RS16965 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 3,795,654 to 3,796,151 _RS16965
Locus Name Description Strand Phenotype
HGI48_RS16915 HGI48_RS16915 methionine ABC transporter ATP-binding protein MetN + cofit
HGI48_RS16920 HGI48_RS16920 methionine ABC transporter permease MetI + cofit
HGI48_RS16925 HGI48_RS16925 MetQ/NlpA family lipoprotein + cofit
HGI48_RS16930 HGI48_RS16930 Rcs stress response system protein RcsF + insig.
HGI48_RS16935 HGI48_RS16935 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO + insig.
HGI48_RS16940 HGI48_RS16940 proline--tRNA ligase + no data
HGI48_RS16945 HGI48_RS16945 RNA polymerase sigma factor RpoS - insig.
HGI48_RS16950 HGI48_RS16950 murein hydrolase activator NlpD - no data
HGI48_RS16955 HGI48_RS16955 protein-L-isoaspartate(D-aspartate) O-methyltransferase - no data
HGI48_RS16960 HGI48_RS16960 tRNA pseudouridine(13) synthase TruD - insig.
HGI48_RS16965 HGI48_RS16965 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase - no data

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