Gene info for HGI48_RS12260 in Dickeya dianthicola 67-19

Annotation: PAS domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_CP051429, + strand, nucleotides 2,674,348 to 2,675,895
See nucleotide sequence around HGI48_RS12260 or for all of scaffold NZ_CP051429

Other databases: NCBI, uniprot: A0A7L9RE91

Nearby Genes

500 ntHGI48_RS12235 and HGI48_RS12240 are separated by 390 nucleotidesHGI48_RS12240 and HGI48_RS12245 are separated by 274 nucleotidesHGI48_RS12245 and HGI48_RS12250 are separated by 190 nucleotidesHGI48_RS12250 and HGI48_RS12255 are separated by 109 nucleotidesHGI48_RS12255 and HGI48_RS12260 are separated by 798 nucleotidesHGI48_RS12260 and HGI48_RS12265 are separated by 66 nucleotidesHGI48_RS12265 and HGI48_RS12270 are separated by 330 nucleotidesHGI48_RS12270 and HGI48_RS12275 are separated by 162 nucleotidesHGI48_RS12275 and HGI48_RS12280 are separated by 92 nucleotidesHGI48_RS12280 and HGI48_RS12285 overlap by 8 nucleotides HGI48_RS12235: HGI48_RS12235 - ogr/Delta-like zinc finger family protein, at 2,666,353 to 2,666,544 _RS12235 HGI48_RS12240: HGI48_RS12240 - guanine deaminase, at 2,666,935 to 2,668,236 _RS12240 HGI48_RS12245: HGI48_RS12245 - diguanylate cyclase, at 2,668,511 to 2,670,325 _RS12245 HGI48_RS12250: HGI48_RS12250 - Tar ligand binding domain-containing protein, at 2,670,516 to 2,672,204 _RS12250 HGI48_RS12255: HGI48_RS12255 - alginate lyase family protein, at 2,672,314 to 2,673,549 _RS12255 HGI48_RS12260: HGI48_RS12260 - PAS domain-containing protein, at 2,674,348 to 2,675,895 _RS12260 HGI48_RS12265: HGI48_RS12265 - hypothetical protein, at 2,675,962 to 2,676,261 _RS12265 HGI48_RS12270: HGI48_RS12270 - metallophosphoesterase, at 2,676,592 to 2,677,278 _RS12270 HGI48_RS12275: HGI48_RS12275 - ABC transporter substrate-binding protein, at 2,677,441 to 2,679,042 _RS12275 HGI48_RS12280: HGI48_RS12280 - ATP-binding cassette domain-containing protein, at 2,679,135 to 2,679,818 _RS12280 HGI48_RS12285: HGI48_RS12285 - ABC transporter ATP-binding protein, at 2,679,811 to 2,680,659 _RS12285
Locus Name Description Strand Phenotype
HGI48_RS12235 HGI48_RS12235 ogr/Delta-like zinc finger family protein + no data
HGI48_RS12240 HGI48_RS12240 guanine deaminase + insig.
HGI48_RS12245 HGI48_RS12245 diguanylate cyclase + insig.
HGI48_RS12250 HGI48_RS12250 Tar ligand binding domain-containing protein + insig.
HGI48_RS12255 HGI48_RS12255 alginate lyase family protein - insig.
HGI48_RS12260 HGI48_RS12260 PAS domain-containing protein + insig.
HGI48_RS12265 HGI48_RS12265 hypothetical protein - insig.
HGI48_RS12270 HGI48_RS12270 metallophosphoesterase - insig.
HGI48_RS12275 HGI48_RS12275 ABC transporter substrate-binding protein - cofit
HGI48_RS12280 HGI48_RS12280 ATP-binding cassette domain-containing protein - strong
HGI48_RS12285 HGI48_RS12285 ABC transporter ATP-binding protein - insig.

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