Gene info for HGI48_RS12080 in Dickeya dianthicola 67-19

Annotation: 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
Type 1: Protein-coding gene
Located on scaffold NZ_CP051429, + strand, nucleotides 2,639,794 to 2,641,242
See nucleotide sequence around HGI48_RS12080 or for all of scaffold NZ_CP051429

Other databases: NCBI, uniprot: A0A7L9RE94

Nearby Genes

500 ntHGI48_RS12055 and HGI48_RS12060 are separated by 19 nucleotidesHGI48_RS12060 and HGI48_RS12065 are separated by 84 nucleotidesHGI48_RS12065 and HGI48_RS12070 are separated by 299 nucleotidesHGI48_RS12070 and HGI48_RS12075 are separated by 37 nucleotidesHGI48_RS12075 and HGI48_RS12080 are separated by 109 nucleotidesHGI48_RS12080 and HGI48_RS12085 are separated by 99 nucleotidesHGI48_RS12085 and HGI48_RS12090 are separated by 116 nucleotidesHGI48_RS12090 and HGI48_RS12095 are separated by 665 nucleotidesHGI48_RS12095 and HGI48_RS12100 are separated by 154 nucleotidesHGI48_RS12100 and HGI48_RS12105 overlap by 4 nucleotides HGI48_RS12055: HGI48_RS12055 - carboxy terminal-processing peptidase, at 2,632,115 to 2,634,136 _RS12055 HGI48_RS12060: HGI48_RS12060 - RNA chaperone ProQ, at 2,634,156 to 2,634,887 _RS12060 HGI48_RS12065: HGI48_RS12065 - GAF domain-containing protein, at 2,634,972 to 2,635,478 _RS12065 HGI48_RS12070: HGI48_RS12070 - membrane integrity lipid transport subunit YebS, at 2,635,778 to 2,637,016 _RS12070 HGI48_RS12075: HGI48_RS12075 - MCE family protein, at 2,637,054 to 2,639,684 _RS12075 HGI48_RS12080: HGI48_RS12080 - 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF, at 2,639,794 to 2,641,242 _RS12080 HGI48_RS12085: HGI48_RS12085 - YebW family protein, at 2,641,342 to 2,641,533 _RS12085 HGI48_RS12090: HGI48_RS12090 - HAMP domain-containing protein, at 2,641,650 to 2,643,647 _RS12090 HGI48_RS12095: HGI48_RS12095 - helix-turn-helix domain-containing protein, at 2,644,313 to 2,645,125 _RS12095 HGI48_RS12100: HGI48_RS12100 - hypothetical protein, at 2,645,280 to 2,645,750 _RS12100 HGI48_RS12105: HGI48_RS12105 - replication protein B, at 2,645,747 to 2,646,277 _RS12105
Locus Name Description Strand Phenotype
HGI48_RS12055 HGI48_RS12055 carboxy terminal-processing peptidase - strong
HGI48_RS12060 HGI48_RS12060 RNA chaperone ProQ - insig.
HGI48_RS12065 HGI48_RS12065 GAF domain-containing protein - insig.
HGI48_RS12070 HGI48_RS12070 membrane integrity lipid transport subunit YebS + insig.
HGI48_RS12075 HGI48_RS12075 MCE family protein + cofit
HGI48_RS12080 HGI48_RS12080 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF + insig.
HGI48_RS12085 HGI48_RS12085 YebW family protein + insig.
HGI48_RS12090 HGI48_RS12090 HAMP domain-containing protein - insig.
HGI48_RS12095 HGI48_RS12095 helix-turn-helix domain-containing protein - no data
HGI48_RS12100 HGI48_RS12100 hypothetical protein + insig.
HGI48_RS12105 HGI48_RS12105 replication protein B + insig.

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