Gene info for HGI48_RS11400 in Dickeya dianthicola 67-19

Annotation: carbohydrate ABC transporter substrate-binding protein
Type 1: Protein-coding gene
Located on scaffold NZ_CP051429, + strand, nucleotides 2,482,578 to 2,483,870
See nucleotide sequence around HGI48_RS11400 or for all of scaffold NZ_CP051429

Other databases: NCBI, uniprot: A0A7L9RDU7

Nearby Genes

500 ntHGI48_RS11375 and HGI48_RS11380 are separated by 261 nucleotidesHGI48_RS11380 and HGI48_RS11385 are separated by 44 nucleotidesHGI48_RS11385 and HGI48_RS11390 overlap by 8 nucleotidesHGI48_RS11390 and HGI48_RS11395 are separated by 13 nucleotidesHGI48_RS11395 and HGI48_RS11400 are separated by 14 nucleotidesHGI48_RS11400 and HGI48_RS11405 are separated by 249 nucleotidesHGI48_RS11405 and HGI48_RS11410 are separated by 277 nucleotidesHGI48_RS11410 and HGI48_RS11415 are separated by 77 nucleotidesHGI48_RS11415 and HGI48_RS11420 are separated by 137 nucleotidesHGI48_RS11420 and HGI48_RS11425 are separated by 64 nucleotides HGI48_RS11375: HGI48_RS11375 - 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD, at 2,476,938 to 2,477,699 _RS11375 HGI48_RS11380: HGI48_RS11380 - pectate lyase, at 2,477,961 to 2,479,592 _RS11380 HGI48_RS11385: HGI48_RS11385 - sugar ABC transporter permease, at 2,479,637 to 2,480,527 _RS11385 HGI48_RS11390: HGI48_RS11390 - carbohydrate ABC transporter permease, at 2,480,520 to 2,481,422 _RS11390 HGI48_RS11395: HGI48_RS11395 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 2,481,436 to 2,482,563 _RS11395 HGI48_RS11400: HGI48_RS11400 - carbohydrate ABC transporter substrate-binding protein, at 2,482,578 to 2,483,870 _RS11400 HGI48_RS11405: HGI48_RS11405 - oligogalacturonate-specific porin KdgM, at 2,484,120 to 2,484,839 _RS11405 HGI48_RS11410: HGI48_RS11410 - alpha/beta hydrolase, at 2,485,117 to 2,486,085 _RS11410 HGI48_RS11415: HGI48_RS11415 - metal-dependent hydrolase, at 2,486,163 to 2,486,741 _RS11415 HGI48_RS11420: HGI48_RS11420 - L-cystine transporter, at 2,486,879 to 2,488,270 _RS11420 HGI48_RS11425: HGI48_RS11425 - osmotically-inducible lipoprotein OsmE, at 2,488,335 to 2,488,664 _RS11425
Locus Name Description Strand Phenotype
HGI48_RS11375 HGI48_RS11375 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD + cofit
HGI48_RS11380 HGI48_RS11380 pectate lyase + insig.
HGI48_RS11385 HGI48_RS11385 sugar ABC transporter permease + insig.
HGI48_RS11390 HGI48_RS11390 carbohydrate ABC transporter permease + insig.
HGI48_RS11395 HGI48_RS11395 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC + insig.
HGI48_RS11400 HGI48_RS11400 carbohydrate ABC transporter substrate-binding protein + insig.
HGI48_RS11405 HGI48_RS11405 oligogalacturonate-specific porin KdgM + insig.
HGI48_RS11410 HGI48_RS11410 alpha/beta hydrolase + insig.
HGI48_RS11415 HGI48_RS11415 metal-dependent hydrolase + insig.
HGI48_RS11420 HGI48_RS11420 L-cystine transporter + insig.
HGI48_RS11425 HGI48_RS11425 osmotically-inducible lipoprotein OsmE - insig.

Or browse nearby genes

Or see the comparative fitness browser