Gene info for HGI48_RS11390 in Dickeya dianthicola 67-19

Annotation: carbohydrate ABC transporter permease
Type 1: Protein-coding gene
Located on scaffold NZ_CP051429, + strand, nucleotides 2,480,520 to 2,481,422
See nucleotide sequence around HGI48_RS11390 or for all of scaffold NZ_CP051429

Other databases: NCBI, uniprot: A0A3A4CHV7

Nearby Genes

500 ntHGI48_RS11365 and HGI48_RS11370 are separated by 323 nucleotidesHGI48_RS11370 and HGI48_RS11375 are separated by 180 nucleotidesHGI48_RS11375 and HGI48_RS11380 are separated by 261 nucleotidesHGI48_RS11380 and HGI48_RS11385 are separated by 44 nucleotidesHGI48_RS11385 and HGI48_RS11390 overlap by 8 nucleotidesHGI48_RS11390 and HGI48_RS11395 are separated by 13 nucleotidesHGI48_RS11395 and HGI48_RS11400 are separated by 14 nucleotidesHGI48_RS11400 and HGI48_RS11405 are separated by 249 nucleotidesHGI48_RS11405 and HGI48_RS11410 are separated by 277 nucleotidesHGI48_RS11410 and HGI48_RS11415 are separated by 77 nucleotides HGI48_RS11365: HGI48_RS11365 - cupin domain-containing protein, at 2,475,265 to 2,475,597 _RS11365 HGI48_RS11370: HGI48_RS11370 - 5-dehydro-4-deoxy-D-glucuronate isomerase, at 2,475,921 to 2,476,757 _RS11370 HGI48_RS11375: HGI48_RS11375 - 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD, at 2,476,938 to 2,477,699 _RS11375 HGI48_RS11380: HGI48_RS11380 - pectate lyase, at 2,477,961 to 2,479,592 _RS11380 HGI48_RS11385: HGI48_RS11385 - sugar ABC transporter permease, at 2,479,637 to 2,480,527 _RS11385 HGI48_RS11390: HGI48_RS11390 - carbohydrate ABC transporter permease, at 2,480,520 to 2,481,422 _RS11390 HGI48_RS11395: HGI48_RS11395 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 2,481,436 to 2,482,563 _RS11395 HGI48_RS11400: HGI48_RS11400 - carbohydrate ABC transporter substrate-binding protein, at 2,482,578 to 2,483,870 _RS11400 HGI48_RS11405: HGI48_RS11405 - oligogalacturonate-specific porin KdgM, at 2,484,120 to 2,484,839 _RS11405 HGI48_RS11410: HGI48_RS11410 - alpha/beta hydrolase, at 2,485,117 to 2,486,085 _RS11410 HGI48_RS11415: HGI48_RS11415 - metal-dependent hydrolase, at 2,486,163 to 2,486,741 _RS11415
Locus Name Description Strand Phenotype
HGI48_RS11365 HGI48_RS11365 cupin domain-containing protein - cofit
HGI48_RS11370 HGI48_RS11370 5-dehydro-4-deoxy-D-glucuronate isomerase + cofit
HGI48_RS11375 HGI48_RS11375 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD + cofit
HGI48_RS11380 HGI48_RS11380 pectate lyase + insig.
HGI48_RS11385 HGI48_RS11385 sugar ABC transporter permease + insig.
HGI48_RS11390 HGI48_RS11390 carbohydrate ABC transporter permease + insig.
HGI48_RS11395 HGI48_RS11395 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC + insig.
HGI48_RS11400 HGI48_RS11400 carbohydrate ABC transporter substrate-binding protein + insig.
HGI48_RS11405 HGI48_RS11405 oligogalacturonate-specific porin KdgM + insig.
HGI48_RS11410 HGI48_RS11410 alpha/beta hydrolase + insig.
HGI48_RS11415 HGI48_RS11415 metal-dependent hydrolase + insig.

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