Gene info for HGI48_RS08005 in Dickeya dianthicola 67-19

Annotation: type VI secretion system protein TssA
Type 1: Protein-coding gene
Located on scaffold NZ_CP051429, + strand, nucleotides 1,716,492 to 1,717,931
See nucleotide sequence around HGI48_RS08005 or for all of scaffold NZ_CP051429

Other databases: NCBI, uniprot: A0A7L9RJB9

Nearby Genes

500 ntHGI48_RS07980 and HGI48_RS07985 are separated by 16 nucleotidesHGI48_RS07985 and HGI48_RS07990 are separated by 15 nucleotidesHGI48_RS07990 and HGI48_RS07995 are separated by 2 nucleotidesHGI48_RS07995 and HGI48_RS08000 overlap by 1 nucleotidesHGI48_RS08000 and HGI48_RS08005 are separated by 11 nucleotidesHGI48_RS08005 and HGI48_RS08010 are separated by 25 nucleotidesHGI48_RS08010 and HGI48_RS08015 are separated by 51 nucleotidesHGI48_RS08015 and HGI48_RS08020 are separated by 70 nucleotidesHGI48_RS08020 and HGI48_RS08025 are separated by 22 nucleotidesHGI48_RS08025 and HGI48_RS08030 are separated by 244 nucleotides HGI48_RS07980: HGI48_RS07980 - type VI secretion system baseplate subunit TssK, at 1,709,630 to 1,710,967 _RS07980 HGI48_RS07985: HGI48_RS07985 - DotU family type IV/VI secretion system protein, at 1,710,984 to 1,711,760 _RS07985 HGI48_RS07990: HGI48_RS07990 - type VI secretion system ATPase TssH, at 1,711,776 to 1,714,376 _RS07990 HGI48_RS07995: HGI48_RS07995 - sigma-54-dependent Fis family transcriptional regulator, at 1,714,379 to 1,715,917 _RS07995 HGI48_RS08000: HGI48_RS08000 - type VI secretion system-associated protein TagO, at 1,715,917 to 1,716,480 _RS08000 HGI48_RS08005: HGI48_RS08005 - type VI secretion system protein TssA, at 1,716,492 to 1,717,931 _RS08005 HGI48_RS08010: HGI48_RS08010 - type VI secretion system membrane subunit TssM, at 1,717,957 to 1,721,451 _RS08010 HGI48_RS08015: HGI48_RS08015 - type VI secretion system ImpA family N-terminal domain-containing protein, at 1,721,503 to 1,722,936 _RS08015 HGI48_RS08020: HGI48_RS08020 - SEL1-like repeat protein, at 1,723,007 to 1,724,374 _RS08020 HGI48_RS08025: HGI48_RS08025 - DKNYY domain-containing protein, at 1,724,397 to 1,725,329 _RS08025 HGI48_RS08030: HGI48_RS08030 - GGDEF domain-containing protein, at 1,725,574 to 1,727,133 _RS08030
Locus Name Description Strand Phenotype
HGI48_RS07980 HGI48_RS07980 type VI secretion system baseplate subunit TssK + insig.
HGI48_RS07985 HGI48_RS07985 DotU family type IV/VI secretion system protein + insig.
HGI48_RS07990 HGI48_RS07990 type VI secretion system ATPase TssH + insig.
HGI48_RS07995 HGI48_RS07995 sigma-54-dependent Fis family transcriptional regulator + insig.
HGI48_RS08000 HGI48_RS08000 type VI secretion system-associated protein TagO + insig.
HGI48_RS08005 HGI48_RS08005 type VI secretion system protein TssA + insig.
HGI48_RS08010 HGI48_RS08010 type VI secretion system membrane subunit TssM + insig.
HGI48_RS08015 HGI48_RS08015 type VI secretion system ImpA family N-terminal domain-containing protein + insig.
HGI48_RS08020 HGI48_RS08020 SEL1-like repeat protein + insig.
HGI48_RS08025 HGI48_RS08025 DKNYY domain-containing protein + insig.
HGI48_RS08030 HGI48_RS08030 GGDEF domain-containing protein + insig.

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