Gene info for HGI48_RS06215 in Dickeya dianthicola 67-19

Annotation: peptidoglycan DD-transpeptidase MrdA
Type 1: Protein-coding gene
Located on scaffold NZ_CP051429, - strand, nucleotides 1,320,347 to 1,322,257
See nucleotide sequence around HGI48_RS06215 or for all of scaffold NZ_CP051429

Other databases: NCBI, uniprot: A0A7L9RBM2

Nearby Genes

500 ntHGI48_RS06190 and HGI48_RS06195 are separated by 110 nucleotidesHGI48_RS06195 and HGI48_RS06200 are separated by 132 nucleotidesHGI48_RS06200 and HGI48_RS06205 are separated by 179 nucleotidesHGI48_RS06205 and HGI48_RS06210 are separated by 9 nucleotidesHGI48_RS06210 and HGI48_RS06215 are separated by 7 nucleotidesHGI48_RS06215 and HGI48_RS06220 are separated by 36 nucleotidesHGI48_RS06220 and HGI48_RS06225 are separated by 1 nucleotidesHGI48_RS06225 and HGI48_RS06230 are separated by 157 nucleotidesHGI48_RS06230 and HGI48_RS06235 overlap by 11 nucleotidesHGI48_RS06235 and HGI48_RS06240 overlap by 4 nucleotides HGI48_RS06190: HGI48_RS06190 - lipoyl(octanoyl) transferase LipB, at 1,315,437 to 1,316,156 _RS06190 HGI48_RS06195: HGI48_RS06195 - YbeD family protein, at 1,316,267 to 1,316,530 _RS06195 HGI48_RS06200: HGI48_RS06200 - D-alanyl-D-alanine carboxypeptidase DacA, at 1,316,663 to 1,317,874 _RS06200 HGI48_RS06205: HGI48_RS06205 - endolytic peptidoglycan transglycosylase RlpA, at 1,318,054 to 1,319,217 _RS06205 HGI48_RS06210: HGI48_RS06210 - peptidoglycan glycosyltransferase MrdB, at 1,319,227 to 1,320,339 _RS06210 HGI48_RS06215: HGI48_RS06215 - peptidoglycan DD-transpeptidase MrdA, at 1,320,347 to 1,322,257 _RS06215 HGI48_RS06220: HGI48_RS06220 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH, at 1,322,294 to 1,322,764 _RS06220 HGI48_RS06225: HGI48_RS06225 - ribosome silencing factor, at 1,322,766 to 1,323,083 _RS06225 HGI48_RS06230: HGI48_RS06230 - nicotinate-nucleotide adenylyltransferase, at 1,323,241 to 1,323,915 _RS06230 HGI48_RS06235: HGI48_RS06235 - DNA polymerase III subunit delta, at 1,323,905 to 1,324,936 _RS06235 HGI48_RS06240: HGI48_RS06240 - LPS assembly lipoprotein LptE, at 1,324,933 to 1,325,487 _RS06240
Locus Name Description Strand Phenotype
HGI48_RS06190 HGI48_RS06190 lipoyl(octanoyl) transferase LipB - no data
HGI48_RS06195 HGI48_RS06195 YbeD family protein - no data
HGI48_RS06200 HGI48_RS06200 D-alanyl-D-alanine carboxypeptidase DacA - cofit
HGI48_RS06205 HGI48_RS06205 endolytic peptidoglycan transglycosylase RlpA - insig.
HGI48_RS06210 HGI48_RS06210 peptidoglycan glycosyltransferase MrdB - no data
HGI48_RS06215 HGI48_RS06215 peptidoglycan DD-transpeptidase MrdA - no data
HGI48_RS06220 HGI48_RS06220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH - no data
HGI48_RS06225 HGI48_RS06225 ribosome silencing factor - insig.
HGI48_RS06230 HGI48_RS06230 nicotinate-nucleotide adenylyltransferase - no data
HGI48_RS06235 HGI48_RS06235 DNA polymerase III subunit delta - no data
HGI48_RS06240 HGI48_RS06240 LPS assembly lipoprotein LptE - no data

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