Gene info for HER17_RS12840 in Pectobacterium carotovorum WPP14

Annotation: LysR family transcriptional regulator
Type 1: Protein-coding gene
Located on scaffold NZ_CP051652, - strand, nucleotides 2,859,705 to 2,860,577
See nucleotide sequence around HER17_RS12840 or for all of scaffold NZ_CP051652

Other databases: NCBI

Nearby Genes

500 ntHER17_RS12815 and HER17_RS12820 are separated by 71 nucleotidesHER17_RS12820 and HER17_RS12825 are separated by 436 nucleotidesHER17_RS12825 and HER17_RS12830 are separated by 463 nucleotidesHER17_RS12830 and HER17_RS12835 are separated by 343 nucleotidesHER17_RS12835 and HER17_RS12840 are separated by 135 nucleotidesHER17_RS12840 and HER17_RS12845 are separated by 120 nucleotidesHER17_RS12845 and HER17_RS12850 are separated by 68 nucleotidesHER17_RS12850 and HER17_RS12855 are separated by 320 nucleotidesHER17_RS12855 and HER17_RS12860 are separated by 17 nucleotidesHER17_RS12860 and HER17_RS12865 overlap by 4 nucleotides HER17_RS12815: HER17_RS12815 - sugar ABC transporter ATP-binding protein, at 2,851,249 to 2,852,760 _RS12815 HER17_RS12820: HER17_RS12820 - ABC transporter permease, at 2,852,832 to 2,853,752 _RS12820 HER17_RS12825: HER17_RS12825 - 2-hydroxyacid dehydrogenase, at 2,854,189 to 2,855,178 _RS12825 HER17_RS12830: HER17_RS12830 - TonB-dependent receptor, at 2,855,642 to 2,857,750 _RS12830 HER17_RS12835: HER17_RS12835 - amino acid permease, at 2,858,094 to 2,859,569 _RS12835 HER17_RS12840: HER17_RS12840 - LysR family transcriptional regulator, at 2,859,705 to 2,860,577 _RS12840 HER17_RS12845: HER17_RS12845 - YeiH family protein, at 2,860,698 to 2,861,771 _RS12845 HER17_RS12850: HER17_RS12850 - deoxyribonuclease IV, at 2,861,840 to 2,862,685 _RS12850 HER17_RS12855: HER17_RS12855 - PTS fructose transporter subunit IIBC, at 2,863,006 to 2,864,697 _RS12855 HER17_RS12860: HER17_RS12860 - 1-phosphofructokinase, at 2,864,715 to 2,865,653 _RS12860 HER17_RS12865: HER17_RS12865 - fused PTS fructose transporter subunit IIA/HPr protein, at 2,865,650 to 2,866,783 _RS12865
Locus Name Description Strand Phenotype
HER17_RS12815 HER17_RS12815 sugar ABC transporter ATP-binding protein + cofit
HER17_RS12820 HER17_RS12820 ABC transporter permease + insig.
HER17_RS12825 HER17_RS12825 2-hydroxyacid dehydrogenase - cofit
HER17_RS12830 HER17_RS12830 TonB-dependent receptor - insig.
HER17_RS12835 HER17_RS12835 amino acid permease - insig.
HER17_RS12840 HER17_RS12840 LysR family transcriptional regulator - cofit
HER17_RS12845 HER17_RS12845 YeiH family protein + insig.
HER17_RS12850 HER17_RS12850 deoxyribonuclease IV + insig.
HER17_RS12855 HER17_RS12855 PTS fructose transporter subunit IIBC - cofit
HER17_RS12860 HER17_RS12860 1-phosphofructokinase - strong
HER17_RS12865 HER17_RS12865 fused PTS fructose transporter subunit IIA/HPr protein - cofit

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