Gene info for HER17_RS10020 in Pectobacterium carotovorum WPP14

Annotation: RNA polymerase sigma factor
Type 1: Protein-coding gene
Located on scaffold NZ_CP051652, + strand, nucleotides 2,215,795 to 2,216,340
See nucleotide sequence around HER17_RS10020 or for all of scaffold NZ_CP051652

Other databases: NCBI

Nearby Genes

500 ntHER17_RS09995 and HER17_RS10000 overlap by 11 nucleotidesHER17_RS10000 and HER17_RS10005 overlap by 1 nucleotidesHER17_RS10005 and HER17_RS10010 are separated by 8 nucleotidesHER17_RS10010 and HER17_RS10015 overlap by 4 nucleotidesHER17_RS10015 and HER17_RS10020 are separated by 328 nucleotidesHER17_RS10020 and HER17_RS10025 are separated by 241 nucleotidesHER17_RS10025 and HER17_RS10030 are separated by 36 nucleotidesHER17_RS10030 and HER17_RS10035 are separated by 368 nucleotidesHER17_RS10035 and HER17_RS10040 are separated by 61 nucleotidesHER17_RS10040 and HER17_RS10045 are separated by 343 nucleotides HER17_RS09995: HER17_RS09995 - hypothetical protein, at 2,209,427 to 2,209,864 _RS09995 HER17_RS10000: HER17_RS10000 - type III secretion system ATPase SctN, at 2,209,854 to 2,211,221 _RS10000 HER17_RS10005: HER17_RS10005 - type III secretion protein, at 2,211,221 to 2,212,150 _RS10005 HER17_RS10010: HER17_RS10010 - type III secretion system export apparatus subunit SctV, at 2,212,159 to 2,214,261 _RS10010 HER17_RS10015: HER17_RS10015 - type III secretion system gatekeeper subunit SctW, at 2,214,258 to 2,215,466 _RS10015 HER17_RS10020: HER17_RS10020 - RNA polymerase sigma factor, at 2,215,795 to 2,216,340 _RS10020 HER17_RS10025: HER17_RS10025 - PAS domain S-box protein, at 2,216,582 to 2,218,051 _RS10025 HER17_RS10030: HER17_RS10030 - response regulator transcription factor, at 2,218,088 to 2,218,729 _RS10030 HER17_RS10035: HER17_RS10035 - sigma 54-interacting transcriptional regulator, at 2,219,098 to 2,220,183 _RS10035 HER17_RS10040: HER17_RS10040 - EAL domain-containing protein, at 2,220,245 to 2,221,825 _RS10040 HER17_RS10045: HER17_RS10045 - Hrp pili protein HrpA, at 2,222,169 to 2,222,375 _RS10045
Locus Name Description Strand Phenotype
HER17_RS09995 HER17_RS09995 hypothetical protein - insig.
HER17_RS10000 HER17_RS10000 type III secretion system ATPase SctN - insig.
HER17_RS10005 HER17_RS10005 type III secretion protein - cofit
HER17_RS10010 HER17_RS10010 type III secretion system export apparatus subunit SctV - insig.
HER17_RS10015 HER17_RS10015 type III secretion system gatekeeper subunit SctW - cofit
HER17_RS10020 HER17_RS10020 RNA polymerase sigma factor + insig.
HER17_RS10025 HER17_RS10025 PAS domain S-box protein + insig.
HER17_RS10030 HER17_RS10030 response regulator transcription factor + cofit
HER17_RS10035 HER17_RS10035 sigma 54-interacting transcriptional regulator + insig.
HER17_RS10040 HER17_RS10040 EAL domain-containing protein - insig.
HER17_RS10045 HER17_RS10045 Hrp pili protein HrpA + no data

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