Gene info for HER17_RS06680 in Pectobacterium carotovorum WPP14

Annotation: type II secretion system protein GspC
Type 1: Protein-coding gene
Located on scaffold NZ_CP051652, + strand, nucleotides 1,487,481 to 1,488,344
See nucleotide sequence around HER17_RS06680 or for all of scaffold NZ_CP051652

Other databases: NCBI

Nearby Genes

500 ntHER17_RS06655 and HER17_RS06660 are separated by 121 nucleotidesHER17_RS06660 and HER17_RS06665 overlap by 4 nucleotidesHER17_RS06665 and HER17_RS06670 are separated by 529 nucleotidesHER17_RS06670 and HER17_RS06675 are separated by 126 nucleotidesHER17_RS06675 and HER17_RS06680 are separated by 50 nucleotidesHER17_RS06680 and HER17_RS06685 are separated by 88 nucleotidesHER17_RS06685 and HER17_RS06690 overlap by 4 nucleotidesHER17_RS06690 and HER17_RS06695 are separated by 1 nucleotidesHER17_RS06695 and HER17_RS06700 are separated by 32 nucleotidesHER17_RS06700 and HER17_RS06705 are separated by 274 nucleotides HER17_RS06655: HER17_RS06655 - alanine transaminase, at 1,480,884 to 1,482,125 _RS06655 HER17_RS06660: HER17_RS06660 - type II secretion system pilot lipoprotein GspS, at 1,482,247 to 1,482,660 _RS06660 HER17_RS06665: HER17_RS06665 - type II secretion system assembly factor GspB, at 1,482,657 to 1,483,226 _RS06665 HER17_RS06670: HER17_RS06670 - polysaccharide lyase family 1 protein, at 1,483,756 to 1,485,324 _RS06670 HER17_RS06675: HER17_RS06675 - glycoside hydrolase family 28 protein, at 1,485,451 to 1,487,430 _RS06675 HER17_RS06680: HER17_RS06680 - type II secretion system protein GspC, at 1,487,481 to 1,488,344 _RS06680 HER17_RS06685: HER17_RS06685 - type II secretion system secretin GspD, at 1,488,433 to 1,490,385 _RS06685 HER17_RS06690: HER17_RS06690 - type II secretion system ATPase GspE, at 1,490,382 to 1,491,878 _RS06690 HER17_RS06695: HER17_RS06695 - type II secretion system inner membrane protein GspF, at 1,491,880 to 1,493,106 _RS06695 HER17_RS06700: HER17_RS06700 - type II secretion system major pseudopilin GspG, at 1,493,139 to 1,493,609 _RS06700 HER17_RS06705: HER17_RS06705 - type II secretion system minor pseudopilin GspH, at 1,493,884 to 1,494,450 _RS06705
Locus Name Description Strand Phenotype
HER17_RS06655 HER17_RS06655 alanine transaminase + insig.
HER17_RS06660 HER17_RS06660 type II secretion system pilot lipoprotein GspS + insig.
HER17_RS06665 HER17_RS06665 type II secretion system assembly factor GspB - insig.
HER17_RS06670 HER17_RS06670 polysaccharide lyase family 1 protein + insig.
HER17_RS06675 HER17_RS06675 glycoside hydrolase family 28 protein + insig.
HER17_RS06680 HER17_RS06680 type II secretion system protein GspC + cofit
HER17_RS06685 HER17_RS06685 type II secretion system secretin GspD + insig.
HER17_RS06690 HER17_RS06690 type II secretion system ATPase GspE + insig.
HER17_RS06695 HER17_RS06695 type II secretion system inner membrane protein GspF + insig.
HER17_RS06700 HER17_RS06700 type II secretion system major pseudopilin GspG + insig.
HER17_RS06705 HER17_RS06705 type II secretion system minor pseudopilin GspH + insig.

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