Gene info for HER17_RS04820 in Pectobacterium carotovorum WPP14

Annotation: Hcp family type VI secretion system effector
Type 1: Protein-coding gene
Located on scaffold NZ_CP051652, + strand, nucleotides 1,086,617 to 1,087,102
See nucleotide sequence around HER17_RS04820 or for all of scaffold NZ_CP051652

Other databases: NCBI

Nearby Genes

500 ntHER17_RS04795 and HER17_RS04800 are separated by 472 nucleotidesHER17_RS04800 and HER17_RS04805 overlap by 11 nucleotidesHER17_RS04805 and HER17_RS04810 are separated by 462 nucleotidesHER17_RS04810 and HER17_RS04815 are separated by 1332 nucleotidesHER17_RS04815 and HER17_RS04820 are separated by 422 nucleotidesHER17_RS04820 and HER17_RS04825 are separated by 443 nucleotidesHER17_RS04825 and HER17_RS04830 are separated by 331 nucleotidesHER17_RS04830 and HER17_RS04835 are separated by 359 nucleotidesHER17_RS04835 and HER17_RS04840 are separated by 936 nucleotidesHER17_RS04840 and HER17_RS04845 are separated by 22 nucleotides HER17_RS04795: HER17_RS04795 - IS1182 family transposase, at 1,081,165 to 1,082,607 _RS04795 HER17_RS04800: HER17_RS04800 - prevent-host-death protein, at 1,083,080 to 1,083,331 _RS04800 HER17_RS04805: HER17_RS04805 - type II toxin-antitoxin system RelE/ParE family toxin, at 1,083,321 to 1,083,605 _RS04805 HER17_RS04810: HER17_RS04810 - integrase, at 1,084,068 to 1,084,214 _RS04810 HER17_RS04815: HER17_RS04815 - EcsC family protein, at 1,085,547 to 1,086,194 _RS04815 HER17_RS04820: HER17_RS04820 - Hcp family type VI secretion system effector, at 1,086,617 to 1,087,102 _RS04820 HER17_RS04825: HER17_RS04825 - hypothetical protein, at 1,087,546 to 1,088,178 _RS04825 HER17_RS04830: HER17_RS04830 - LysR family transcriptional regulator, at 1,088,510 to 1,089,415 _RS04830 HER17_RS04835: HER17_RS04835 - alpha/beta hydrolase, at 1,089,775 to 1,090,803 _RS04835 HER17_RS04840: HER17_RS04840 - type VI secretion system contractile sheath small subunit, at 1,091,740 to 1,092,243 _RS04840 HER17_RS04845: HER17_RS04845 - type VI secretion system contractile sheath large subunit, at 1,092,266 to 1,093,744 _RS04845
Locus Name Description Strand Phenotype
HER17_RS04795 HER17_RS04795 IS1182 family transposase + insig.
HER17_RS04800 HER17_RS04800 prevent-host-death protein + no data
HER17_RS04805 HER17_RS04805 type II toxin-antitoxin system RelE/ParE family toxin + insig.
HER17_RS04810 HER17_RS04810 integrase + insig.
HER17_RS04815 HER17_RS04815 EcsC family protein - insig.
HER17_RS04820 HER17_RS04820 Hcp family type VI secretion system effector + insig.
HER17_RS04825 HER17_RS04825 hypothetical protein - cofit
HER17_RS04830 HER17_RS04830 LysR family transcriptional regulator - insig.
HER17_RS04835 HER17_RS04835 alpha/beta hydrolase + insig.
HER17_RS04840 HER17_RS04840 type VI secretion system contractile sheath small subunit + insig.
HER17_RS04845 HER17_RS04845 type VI secretion system contractile sheath large subunit + cofit

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