Gene info for HER17_RS03260 in Pectobacterium carotovorum WPP14

Annotation: 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
Type 1: Protein-coding gene
Located on scaffold NZ_CP051652, + strand, nucleotides 736,218 to 736,790
See nucleotide sequence around HER17_RS03260 or for all of scaffold NZ_CP051652

Other databases: NCBI

Nearby Genes

500 ntHER17_RS03235 and HER17_RS03240 overlap by 4 nucleotidesHER17_RS03240 and HER17_RS03245 are separated by 2 nucleotidesHER17_RS03245 and HER17_RS03250 are separated by 326 nucleotidesHER17_RS03250 and HER17_RS03255 are separated by 145 nucleotidesHER17_RS03255 and HER17_RS03260 are separated by 418 nucleotidesHER17_RS03260 and HER17_RS03265 overlap by 1 nucleotidesHER17_RS03265 and HER17_RS03270 are separated by 36 nucleotidesHER17_RS03270 and HER17_RS03275 overlap by 1 nucleotidesHER17_RS03275 and HER17_RS03280 are separated by 188 nucleotidesHER17_RS03280 and HER17_RS03285 are separated by 682 nucleotides HER17_RS03235: HER17_RS03235 - protein transport protein HofC, at 730,441 to 731,646 _RS03235 HER17_RS03240: HER17_RS03240 - type II secretion system protein GspE, at 731,643 to 733,127 _RS03240 HER17_RS03245: HER17_RS03245 - prepilin peptidase-dependent pilin, at 733,130 to 733,576 _RS03245 HER17_RS03250: HER17_RS03250 - carboxylating nicotinate-nucleotide diphosphorylase, at 733,903 to 734,793 _RS03250 HER17_RS03255: HER17_RS03255 - nucleoside-specific channel-forming protein Tsx, at 734,939 to 735,799 _RS03255 HER17_RS03260: HER17_RS03260 - 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD, at 736,218 to 736,790 _RS03260 HER17_RS03265: HER17_RS03265 - beta-lactamase regulator AmpE, at 736,790 to 737,644 _RS03265 HER17_RS03270: HER17_RS03270 - family 43 glycosylhydrolase, at 737,681 to 738,637 _RS03270 HER17_RS03275: HER17_RS03275 - MFS transporter, at 738,637 to 740,049 _RS03275 HER17_RS03280: HER17_RS03280 - amino acid permease, at 740,238 to 741,596 _RS03280 HER17_RS03285: HER17_RS03285 - pyruvate dehydrogenase complex transcriptional repressor PdhR, at 742,279 to 743,043 _RS03285
Locus Name Description Strand Phenotype
HER17_RS03235 HER17_RS03235 protein transport protein HofC - insig.
HER17_RS03240 HER17_RS03240 type II secretion system protein GspE - insig.
HER17_RS03245 HER17_RS03245 prepilin peptidase-dependent pilin - insig.
HER17_RS03250 HER17_RS03250 carboxylating nicotinate-nucleotide diphosphorylase - strong
HER17_RS03255 HER17_RS03255 nucleoside-specific channel-forming protein Tsx - cofit
HER17_RS03260 HER17_RS03260 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD + insig.
HER17_RS03265 HER17_RS03265 beta-lactamase regulator AmpE + insig.
HER17_RS03270 HER17_RS03270 family 43 glycosylhydrolase - insig.
HER17_RS03275 HER17_RS03275 MFS transporter - cofit
HER17_RS03280 HER17_RS03280 amino acid permease - cofit
HER17_RS03285 HER17_RS03285 pyruvate dehydrogenase complex transcriptional repressor PdhR + insig.

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