Gene info for HER17_RS00485 in Pectobacterium carotovorum WPP14

Annotation: RNA polymerase sigma factor RpoH
Type 1: Protein-coding gene
Located on scaffold NZ_CP051652, + strand, nucleotides 114,819 to 115,676
See nucleotide sequence around HER17_RS00485 or for all of scaffold NZ_CP051652

Other databases: NCBI

Nearby Genes

500 ntHER17_RS00460 and HER17_RS00465 are separated by 29 nucleotidesHER17_RS00465 and HER17_RS00470 are separated by 349 nucleotidesHER17_RS00470 and HER17_RS00475 are separated by 5 nucleotidesHER17_RS00475 and HER17_RS00480 overlap by 11 nucleotidesHER17_RS00480 and HER17_RS00485 are separated by 355 nucleotidesHER17_RS00485 and HER17_RS00490 are separated by 83 nucleotidesHER17_RS00490 and HER17_RS00495 are separated by 404 nucleotidesHER17_RS00495 and HER17_RS00500 are separated by 157 nucleotidesHER17_RS00500 and HER17_RS00505 overlap by 4 nucleotidesHER17_RS00505 and HER17_RS00510 overlap by 4 nucleotides HER17_RS00460: HER17_RS00460 - DUF1145 family protein, at 110,132 to 110,407 _RS00460 HER17_RS00465: HER17_RS00465 - 16S rRNA (guanine(966)-N(2))-methyltransferase, at 110,437 to 111,012 _RS00465 HER17_RS00470: HER17_RS00470 - signal recognition particle-docking protein FtsY, at 111,362 to 112,828 _RS00470 HER17_RS00475: HER17_RS00475 - cell division ATP-binding protein FtsE, at 112,834 to 113,505 _RS00475 HER17_RS00480: HER17_RS00480 - permease-like cell division protein FtsX, at 113,495 to 114,463 _RS00480 HER17_RS00485: HER17_RS00485 - RNA polymerase sigma factor RpoH, at 114,819 to 115,676 _RS00485 HER17_RS00490: HER17_RS00490 - aspartate 1-decarboxylase autocleavage activator PanM, at 115,760 to 116,206 _RS00490 HER17_RS00495: HER17_RS00495 - branched-chain amino acid ABC transporter substrate-binding protein, at 116,611 to 117,723 _RS00495 HER17_RS00500: HER17_RS00500 - high-affinity branched-chain amino acid ABC transporter permease LivH, at 117,881 to 118,807 _RS00500 HER17_RS00505: HER17_RS00505 - high-affinity branched-chain amino acid ABC transporter permease LivM, at 118,804 to 120,078 _RS00505 HER17_RS00510: HER17_RS00510 - high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG, at 120,075 to 120,845 _RS00510
Locus Name Description Strand Phenotype
HER17_RS00460 HER17_RS00460 DUF1145 family protein - insig.
HER17_RS00465 HER17_RS00465 16S rRNA (guanine(966)-N(2))-methyltransferase - insig.
HER17_RS00470 HER17_RS00470 signal recognition particle-docking protein FtsY + no data
HER17_RS00475 HER17_RS00475 cell division ATP-binding protein FtsE + cofit
HER17_RS00480 HER17_RS00480 permease-like cell division protein FtsX + cofit
HER17_RS00485 HER17_RS00485 RNA polymerase sigma factor RpoH + no data
HER17_RS00490 HER17_RS00490 aspartate 1-decarboxylase autocleavage activator PanM - cofit
HER17_RS00495 HER17_RS00495 branched-chain amino acid ABC transporter substrate-binding protein + strong
HER17_RS00500 HER17_RS00500 high-affinity branched-chain amino acid ABC transporter permease LivH + strong
HER17_RS00505 HER17_RS00505 high-affinity branched-chain amino acid ABC transporter permease LivM + strong
HER17_RS00510 HER17_RS00510 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG + strong

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