Gene info for HEPCGN_26610 in Escherichia coli ECOR38

Name: lsrF
Annotation: 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
Type 1: Protein-coding gene
Located on scaffold contig_6, + strand, nucleotides 4,078,887 to 4,079,762
See nucleotide sequence around HEPCGN_26610 or for all of scaffold contig_6

Other databases: NCBI

Nearby Genes

500 ntHEPCGN_26585 and lsrR are separated by 409 nucleotideslsrR and lsrC are separated by 248 nucleotideslsrC and lsrD overlap by 1 nucleotideslsrD and lsrB are separated by 11 nucleotideslsrB and lsrF are separated by 26 nucleotideslsrF and lsrG are separated by 23 nucleotideslsrG and tam are separated by 56 nucleotidestam and yneE are separated by 3 nucleotidesyneE and uxaB are separated by 196 nucleotidesuxaB and gGDEF are separated by 227 nucleotides HEPCGN_26585: HEPCGN_26585 - hypothetical protein, at 4,073,523 to 4,074,374 _26585 HEPCGN_26590: lsrR - transcriptional regulator LsrR, at 4,074,784 to 4,075,737 lsrR HEPCGN_26595: lsrC - autoinducer 2 ABC transporter permease LsrC, at 4,075,986 to 4,076,834 lsrC HEPCGN_26600: lsrD - autoinducer 2 ABC transporter permease LsrD, at 4,076,834 to 4,077,826 lsrD HEPCGN_26605: lsrB - autoinducer 2 ABC transporter substrate-binding protein LsrB, at 4,077,838 to 4,078,860 lsrB HEPCGN_26610: lsrF - 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase, at 4,078,887 to 4,079,762 lsrF HEPCGN_26615: lsrG - (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase, at 4,079,786 to 4,080,076 lsrG HEPCGN_26620: tam - trans-aconitate 2-methyltransferase, at 4,080,133 to 4,080,891 tam HEPCGN_26625: yneE - UPF0187 protein YneE, at 4,080,895 to 4,081,809 yneE HEPCGN_26630: uxaB - tagaturonate reductase, at 4,082,006 to 4,083,457 uxaB HEPCGN_26635: gGDEF - diguanylate cyclase, at 4,083,685 to 4,085,103 gGDEF
Locus Name Description Strand Phenotype
HEPCGN_26585 HEPCGN_26585 hypothetical protein - cofit
HEPCGN_26590 lsrR transcriptional regulator LsrR - cofit
HEPCGN_26595 lsrC autoinducer 2 ABC transporter permease LsrC + cofit
HEPCGN_26600 lsrD autoinducer 2 ABC transporter permease LsrD + cofit
HEPCGN_26605 lsrB autoinducer 2 ABC transporter substrate-binding protein LsrB + cofit
HEPCGN_26610 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase + cofit
HEPCGN_26615 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase + cofit
HEPCGN_26620 tam trans-aconitate 2-methyltransferase + cofit
HEPCGN_26625 yneE UPF0187 protein YneE - insig.
HEPCGN_26630 uxaB tagaturonate reductase - cofit
HEPCGN_26635 gGDEF diguanylate cyclase - cofit

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