Gene info for HEPCGN_23600 in Escherichia coli ECOR38

Annotation: GGDEF domain-containing protein
Type 1: Protein-coding gene
Located on scaffold contig_6, + strand, nucleotides 3,518,279 to 3,519,193
See nucleotide sequence around HEPCGN_23600 or for all of scaffold contig_6

Other databases: NCBI

Nearby Genes

500 ntpgaC and pgaB overlap by 8 nucleotidespgaB and HEPCGN_23585 are separated by 33 nucleotidesHEPCGN_23585 and pgaA are separated by 8 nucleotidespgaA and HEPCGN_23595 are separated by 517 nucleotidesHEPCGN_23595 and HEPCGN_23600 overlap by 37 nucleotidesHEPCGN_23600 and Ser_trna are separated by 104 nucleotidesSer_trna and ghrA are separated by 233 nucleotidesghrA and ycdX are separated by 54 nucleotidesycdX and ycdY are separated by 23 nucleotidesycdY and ycdZ are separated by 71 nucleotides HEPCGN_23575: pgaC - poly-beta-1,6-N-acetyl-D-glucosamine synthase, at 3,511,469 to 3,512,794 pgaC HEPCGN_23580: pgaB - poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, at 3,512,787 to 3,514,658 pgaB HEPCGN_23585: HEPCGN_23585 - hypothetical protein, at 3,514,692 to 3,514,805 _23585 HEPCGN_23590: pgaA - poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA, at 3,514,814 to 3,517,237 pgaA HEPCGN_23595: HEPCGN_23595 - Diguanylate cyclase, at 3,517,755 to 3,518,315 _23595 HEPCGN_23600: HEPCGN_23600 - GGDEF domain-containing protein, at 3,518,279 to 3,519,193 _23600 HEPCGN_23605: Ser_trna - tRNA-Ser(gga), at 3,519,298 to 3,519,385 _trna HEPCGN_23610: ghrA - glyoxylate/hydroxypyruvate reductase GhrA, at 3,519,619 to 3,520,557 ghrA HEPCGN_23615: ycdX - zinc-binding phosphatase, at 3,520,612 to 3,521,349 ycdX HEPCGN_23620: ycdY - molecular chaperone YcdY, at 3,521,373 to 3,521,927 ycdY HEPCGN_23625: ycdZ - Inner membrane protein YcdZ, at 3,521,999 to 3,522,520 ycdZ
Locus Name Description Strand Phenotype
HEPCGN_23575 pgaC poly-beta-1,6-N-acetyl-D-glucosamine synthase - insig.
HEPCGN_23580 pgaB poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB - insig.
HEPCGN_23585 HEPCGN_23585 hypothetical protein - insig.
HEPCGN_23590 pgaA poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA - insig.
HEPCGN_23595 HEPCGN_23595 Diguanylate cyclase + no data
HEPCGN_23600 HEPCGN_23600 GGDEF domain-containing protein + insig.
HEPCGN_23605 Ser_trna tRNA-Ser(gga) - no data
HEPCGN_23610 ghrA glyoxylate/hydroxypyruvate reductase GhrA + insig.
HEPCGN_23615 ycdX zinc-binding phosphatase + insig.
HEPCGN_23620 ycdY molecular chaperone YcdY + insig.
HEPCGN_23625 ycdZ Inner membrane protein YcdZ + insig.

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