Gene info for HEPCGN_23020 in Escherichia coli ECOR38

Name: ycaO
Annotation: 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
Type 1: Protein-coding gene
Located on scaffold contig_6, - strand, nucleotides 3,388,487 to 3,390,247
See nucleotide sequence around HEPCGN_23020 or for all of scaffold contig_6

Other databases: NCBI

Nearby Genes

500 ntycaN and ycaK are separated by 99 nucleotidesycaK and pflA are separated by 81 nucleotidespflA and pflB are separated by 191 nucleotidespflB and focA are separated by 54 nucleotidesfocA and ycaO are separated by 66 nucleotidesycaO and ycaP are separated by 129 nucleotidesycaP and serC are separated by 198 nucleotidesserC and aroA are separated by 70 nucleotidesaroA and HEPCGN_23040 are separated by 72 nucleotidesHEPCGN_23040 and ycaL are separated by 206 nucleotides HEPCGN_22995: ycaN - Uncharacterized HTH-type transcriptional regulator YcaN, at 3,382,275 to 3,383,183 ycaN HEPCGN_23000: ycaK - NAD(P)H oxidoreductase, at 3,383,283 to 3,383,873 ycaK HEPCGN_23005: pflA - pyruvate formate lyase 1-activating protein, at 3,383,955 to 3,384,695 pflA HEPCGN_23010: pflB - formate C-acetyltransferase, at 3,384,887 to 3,387,169 pflB HEPCGN_23015: focA - formate transporter FocA, at 3,387,224 to 3,388,420 focA HEPCGN_23020: ycaO - 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO, at 3,388,487 to 3,390,247 ycaO HEPCGN_23025: ycaP - UPF0702 transmembrane protein YcaP, at 3,390,377 to 3,391,069 ycaP HEPCGN_23030: serC - 3-phosphoserine/phosphohydroxythreonine transaminase, at 3,391,268 to 3,392,356 serC HEPCGN_23035: aroA - 3-phosphoshikimate 1-carboxyvinyltransferase, at 3,392,427 to 3,393,710 aroA HEPCGN_23040: HEPCGN_23040 - IS4-like element IS4 family transposase, at 3,393,783 to 3,395,111 _23040 HEPCGN_23045: ycaL - metallopeptidase YcaL, at 3,395,318 to 3,396,082 ycaL
Locus Name Description Strand Phenotype
HEPCGN_22995 ycaN Uncharacterized HTH-type transcriptional regulator YcaN - insig.
HEPCGN_23000 ycaK NAD(P)H oxidoreductase + insig.
HEPCGN_23005 pflA pyruvate formate lyase 1-activating protein - insig.
HEPCGN_23010 pflB formate C-acetyltransferase - insig.
HEPCGN_23015 focA formate transporter FocA - insig.
HEPCGN_23020 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO - insig.
HEPCGN_23025 ycaP UPF0702 transmembrane protein YcaP + insig.
HEPCGN_23030 serC 3-phosphoserine/phosphohydroxythreonine transaminase + strong
HEPCGN_23035 aroA 3-phosphoshikimate 1-carboxyvinyltransferase + strong
HEPCGN_23040 HEPCGN_23040 IS4-like element IS4 family transposase - no data
HEPCGN_23045 ycaL metallopeptidase YcaL + insig.

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