Gene info for HEPCGN_22465 in Escherichia coli ECOR38

Name: ompC
Annotation: porin OmpC
Type 1: Protein-coding gene
Located on scaffold contig_6, + strand, nucleotides 3,265,720 to 3,266,814
See nucleotide sequence around HEPCGN_22465 or for all of scaffold contig_6

Other databases: NCBI

Nearby Genes

500 ntatoC and atoS overlap by 4 nucleotidesatoS and rcsC are separated by 166 nucleotidesrcsC and rcsB are separated by 85 nucleotidesrcsB and rcsD are separated by 16 nucleotidesrcsD and ompC are separated by 738 nucleotidesompC and apbE are separated by 111 nucleotidesapbE and ada are separated by 73 nucleotidesada and alkB overlap by 1 nucleotidesalkB and yojI are separated by 75 nucleotidesyojI and mqo are separated by 217 nucleotides HEPCGN_22430: atoC - acetoacetate metabolism transcriptional regulator AtoC, at 3,255,332 to 3,256,717 atoC HEPCGN_22435: atoS - two-component system sensor histidine kinase AtoS, at 3,256,714 to 3,258,540 atoS HEPCGN_22440: rcsC - two-component system sensor histidine kinase RcsC, at 3,258,707 to 3,261,556 rcsC HEPCGN_22450: rcsB - transcriptional regulator RcsB, at 3,261,642 to 3,262,292 rcsB HEPCGN_22455: rcsD - phosphotransferase RcsD, at 3,262,309 to 3,264,981 rcsD HEPCGN_22465: ompC - porin OmpC, at 3,265,720 to 3,266,814 ompC HEPCGN_22470: apbE - FAD:protein FMN transferase ApbE, at 3,266,926 to 3,267,981 apbE HEPCGN_22475: ada - bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada, at 3,268,055 to 3,269,119 ada HEPCGN_22480: alkB - DNA oxidative demethylase AlkB, at 3,269,119 to 3,269,769 alkB HEPCGN_22485: yojI - microcin J25 efflux ABC transporter YojI, at 3,269,845 to 3,271,488 yojI HEPCGN_22490: mqo - malate dehydrogenase (quinone), at 3,271,706 to 3,273,352 mqo
Locus Name Description Strand Phenotype
HEPCGN_22430 atoC acetoacetate metabolism transcriptional regulator AtoC - cofit
HEPCGN_22435 atoS two-component system sensor histidine kinase AtoS - cofit
HEPCGN_22440 rcsC two-component system sensor histidine kinase RcsC + cofit
HEPCGN_22450 rcsB transcriptional regulator RcsB - strong
HEPCGN_22455 rcsD phosphotransferase RcsD - cofit
HEPCGN_22465 ompC porin OmpC + cofit
HEPCGN_22470 apbE FAD:protein FMN transferase ApbE + cofit
HEPCGN_22475 ada bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada + cofit
HEPCGN_22480 alkB DNA oxidative demethylase AlkB + cofit
HEPCGN_22485 yojI microcin J25 efflux ABC transporter YojI + cofit
HEPCGN_22490 mqo malate dehydrogenase (quinone) + insig.

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