Gene info for HEPCGN_22255 in Escherichia coli ECOR38

Name: ltrA
Annotation: group II intron reverse transcriptase/maturase
Type 1: Protein-coding gene
Located on scaffold contig_6, - strand, nucleotides 3,209,058 to 3,210,581
See nucleotide sequence around HEPCGN_22255 or for all of scaffold contig_6

Other databases: NCBI

Nearby Genes

500 ntyfaY and rhmR are separated by 219 nucleotidesrhmR and HEPCGN_22240 are separated by 14 nucleotidesHEPCGN_22240 and HEPCGN_22245 are separated by 10 nucleotidesHEPCGN_22245 and HEPCGN_22250 are separated by 67 nucleotidesHEPCGN_22250 and ltrA are separated by 191 nucleotidesltrA and HEPCGN_22260 are separated by 591 nucleotidesHEPCGN_22260 and tnp-IS629 overlap by 1 nucleotidestnp-IS629 and rhmD are separated by 113 nucleotidesrhmD and HEPCGN_22275 are separated by 56 nucleotidesHEPCGN_22275 and yfaU are separated by 17 nucleotides HEPCGN_22230: yfaY - nicotinamide mononucleotide deamidase-related protein YfaY, at 3,204,318 to 3,205,520 yfaY HEPCGN_22235: rhmR - Uncharacterized HTH-type transcriptional regulator RhmR, at 3,205,740 to 3,206,522 rhmR HEPCGN_22240: HEPCGN_22240 - Putative dehydratase, at 3,206,537 to 3,207,121 _22240 HEPCGN_22245: HEPCGN_22245 - IS4-like element IS4 family transposase, at 3,207,132 to 3,208,460 _22245 HEPCGN_22250: HEPCGN_22250 - IS629, transposase orfB, truncation, at 3,208,528 to 3,208,866 _22250 HEPCGN_22255: ltrA - group II intron reverse transcriptase/maturase, at 3,209,058 to 3,210,581 ltrA HEPCGN_22260: HEPCGN_22260 - HTH-21 domain-containing protein, at 3,211,173 to 3,211,652 _22260 HEPCGN_22265: tnp-IS629 - IS3 family IS629 transposase, at 3,211,652 to 3,211,978 tnp-IS629 HEPCGN_22270: rhmD - L-rhamnonate dehydratase, at 3,212,092 to 3,212,763 rhmD HEPCGN_22275: HEPCGN_22275 - MFS transporter, at 3,212,820 to 3,214,109 _22275 HEPCGN_22280: yfaU - 2-keto-3-deoxy-L-rhamnonate aldolase, at 3,214,127 to 3,214,930 yfaU
Locus Name Description Strand Phenotype
HEPCGN_22230 yfaY nicotinamide mononucleotide deamidase-related protein YfaY + insig.
HEPCGN_22235 rhmR Uncharacterized HTH-type transcriptional regulator RhmR + insig.
HEPCGN_22240 HEPCGN_22240 Putative dehydratase + cofit
HEPCGN_22245 HEPCGN_22245 IS4-like element IS4 family transposase - no data
HEPCGN_22250 HEPCGN_22250 IS629, transposase orfB, truncation - no data
HEPCGN_22255 ltrA group II intron reverse transcriptase/maturase - no data
HEPCGN_22260 HEPCGN_22260 HTH-21 domain-containing protein - no data
HEPCGN_22265 tnp-IS629 IS3 family IS629 transposase - no data
HEPCGN_22270 rhmD L-rhamnonate dehydratase + insig.
HEPCGN_22275 HEPCGN_22275 MFS transporter + insig.
HEPCGN_22280 yfaU 2-keto-3-deoxy-L-rhamnonate aldolase + insig.

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