Gene info for HEPCGN_20250 in Escherichia coli ECOR38

Name: ratA
Annotation: type II toxin-antitoxin system toxin RatA
Type 1: Protein-coding gene
Located on scaffold contig_6, + strand, nucleotides 2,796,855 to 2,797,331
See nucleotide sequence around HEPCGN_20250 or for all of scaffold contig_6

Other databases: NCBI

Nearby Genes

500 ntHEPCGN_20220 and HEPCGN_20225 are separated by 399 nucleotidesHEPCGN_20225 and ecoRIIM are separated by 402 nucleotidesecoRIIM and HEPCGN_20235 are separated by 34 nucleotidesHEPCGN_20235 and smpB are separated by 811 nucleotidessmpB and ratA are separated by 131 nucleotidesratA and rnfH overlap by 11 nucleotidesrnfH and bamE are separated by 61 nucleotidesbamE and recN are separated by 148 nucleotidesrecN and nadK are separated by 85 nucleotidesnadK and grpE are separated by 3 nucleotides HEPCGN_20220: HEPCGN_20220 - acyltransferase, at 2,790,152 to 2,791,177 _20220 HEPCGN_20225: HEPCGN_20225 - GIY-YIG domain-containing protein, at 2,791,577 to 2,792,350 _20225 HEPCGN_20230: ecoRIIM - Type II methyltransferase M-EcoRII, at 2,792,753 to 2,794,186 ecoRIIM HEPCGN_20235: HEPCGN_20235 - restriction endonuclease, at 2,794,221 to 2,795,429 _20235 HEPCGN_20245: smpB - SsrA-binding protein SmpB, at 2,796,241 to 2,796,723 smpB HEPCGN_20250: ratA - type II toxin-antitoxin system toxin RatA, at 2,796,855 to 2,797,331 ratA HEPCGN_20255: rnfH - RnfH family protein, at 2,797,321 to 2,797,611 rnfH HEPCGN_20260: bamE - outer membrane protein assembly factor BamE, at 2,797,673 to 2,798,014 bamE HEPCGN_20265: recN - DNA repair protein RecN, at 2,798,163 to 2,799,824 recN HEPCGN_20270: nadK - NAD(+) kinase, at 2,799,910 to 2,800,716 nadK HEPCGN_20275: grpE - nucleotide exchange factor GrpE, at 2,800,720 to 2,801,505 grpE
Locus Name Description Strand Phenotype
HEPCGN_20220 HEPCGN_20220 acyltransferase - cofit
HEPCGN_20225 HEPCGN_20225 GIY-YIG domain-containing protein - cofit
HEPCGN_20230 ecoRIIM Type II methyltransferase M-EcoRII + no data
HEPCGN_20235 HEPCGN_20235 restriction endonuclease - insig.
HEPCGN_20245 smpB SsrA-binding protein SmpB - no data
HEPCGN_20250 ratA type II toxin-antitoxin system toxin RatA + no data
HEPCGN_20255 rnfH RnfH family protein + cofit
HEPCGN_20260 bamE outer membrane protein assembly factor BamE - strong
HEPCGN_20265 recN DNA repair protein RecN - cofit
HEPCGN_20270 nadK NAD(+) kinase - no data
HEPCGN_20275 grpE nucleotide exchange factor GrpE + no data

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