Gene info for HEPCGN_16820 in Escherichia coli ECOR38

Name: lptB
Annotation: LPS export ABC transporter ATP-binding protein
Type 1: Protein-coding gene
Located on scaffold contig_6, - strand, nucleotides 2,117,319 to 2,118,044
See nucleotide sequence around HEPCGN_16820 or for all of scaffold contig_6

Other databases: NCBI

Nearby Genes

500 ntnpr and rapZ overlap by 4 nucleotidesrapZ and ptsN are separated by 45 nucleotidesptsN and HEPCGN_16810 are separated by 117 nucleotidesHEPCGN_16810 and rpoN are separated by 22 nucleotidesrpoN and lptB are separated by 47 nucleotideslptB and lptA are separated by 6 nucleotideslptA and lptC overlap by 32 nucleotideslptC and kdsC overlap by 4 nucleotideskdsC and kdsD are separated by 20 nucleotideskdsD and yrbG are separated by 13 nucleotides HEPCGN_16795: npr - PTS phosphocarrier protein NPr, at 2,113,750 to 2,114,022 npr HEPCGN_16800: rapZ - RNase adapter RapZ, at 2,114,019 to 2,114,873 rapZ HEPCGN_16805: ptsN - PTS IIA-like nitrogen regulatory protein PtsN, at 2,114,919 to 2,115,410 ptsN HEPCGN_16810: HEPCGN_16810 - Ribosome hibernation promoting factor, at 2,115,528 to 2,115,815 _16810 HEPCGN_16815: rpoN - RNA polymerase factor sigma-54, at 2,115,838 to 2,117,271 rpoN HEPCGN_16820: lptB - LPS export ABC transporter ATP-binding protein, at 2,117,319 to 2,118,044 lptB HEPCGN_16825: lptA - lipopolysaccharide ABC transporter substrate-binding protein LptA, at 2,118,051 to 2,118,608 lptA HEPCGN_16830: lptC - LPS export ABC transporter periplasmic protein LptC, at 2,118,577 to 2,119,152 lptC HEPCGN_16835: kdsC - 3-deoxy-manno-octulosonate-8-phosphatase KdsC, at 2,119,149 to 2,119,715 kdsC HEPCGN_16840: kdsD - arabinose-5-phosphate isomerase KdsD, at 2,119,736 to 2,120,722 kdsD HEPCGN_16845: yrbG - calcium/sodium antiporter, at 2,120,736 to 2,121,713 yrbG
Locus Name Description Strand Phenotype
HEPCGN_16795 npr PTS phosphocarrier protein NPr - cofit
HEPCGN_16800 rapZ RNase adapter RapZ - strong
HEPCGN_16805 ptsN PTS IIA-like nitrogen regulatory protein PtsN - strong
HEPCGN_16810 HEPCGN_16810 Ribosome hibernation promoting factor - cofit
HEPCGN_16815 rpoN RNA polymerase factor sigma-54 - no data
HEPCGN_16820 lptB LPS export ABC transporter ATP-binding protein - no data
HEPCGN_16825 lptA lipopolysaccharide ABC transporter substrate-binding protein LptA - no data
HEPCGN_16830 lptC LPS export ABC transporter periplasmic protein LptC - cofit
HEPCGN_16835 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC - cofit
HEPCGN_16840 kdsD arabinose-5-phosphate isomerase KdsD - cofit
HEPCGN_16845 yrbG calcium/sodium antiporter - cofit

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