Gene info for HEPCGN_16360 in Escherichia coli ECOR38

Name: def
Annotation: peptide deformylase
Type 1: Protein-coding gene
Located on scaffold contig_6, - strand, nucleotides 2,024,476 to 2,024,985
See nucleotide sequence around HEPCGN_16360 or for all of scaffold contig_6

Other databases: NCBI

Nearby Genes

500 ntarfA and mscL overlap by 4 nucleotidesmscL and trkA are separated by 129 nucleotidestrkA and rsmB are separated by 21 nucleotidesrsmB and fmt are separated by 45 nucleotidesfmt and def are separated by 14 nucleotidesdef and dprA are separated by 129 nucleotidesdprA and smg overlap by 29 nucleotidessmg and yrdD are separated by 28 nucleotidesyrdD and tsaC are separated by 4 nucleotidestsaC and aroE are separated by 4 nucleotides HEPCGN_16335: arfA - alternative ribosome-rescue factor ArfA, at 2,020,026 to 2,020,244 arfA HEPCGN_16340: mscL - large-conductance mechanosensitive channel protein MscL, at 2,020,241 to 2,020,651 mscL HEPCGN_16345: trkA - Trk system potassium transporter TrkA, at 2,020,781 to 2,022,157 trkA HEPCGN_16350: rsmB - 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB, at 2,022,179 to 2,023,468 rsmB HEPCGN_16355: fmt - methionyl-tRNA formyltransferase, at 2,023,514 to 2,024,461 fmt HEPCGN_16360: def - peptide deformylase, at 2,024,476 to 2,024,985 def HEPCGN_16365: dprA - DNA-protecting protein DprA, at 2,025,115 to 2,026,239 dprA HEPCGN_16370: smg - DUF494 domain-containing protein, at 2,026,211 to 2,026,684 smg HEPCGN_16375: yrdD - Uncharacterized protein YrdD, at 2,026,713 to 2,027,255 yrdD HEPCGN_16380: tsaC - L-threonylcarbamoyladenylate synthase type 1 TsaC, at 2,027,260 to 2,027,832 tsaC HEPCGN_16385: aroE - shikimate dehydrogenase, at 2,027,837 to 2,028,655 aroE
Locus Name Description Strand Phenotype
HEPCGN_16335 arfA alternative ribosome-rescue factor ArfA + cofit
HEPCGN_16340 mscL large-conductance mechanosensitive channel protein MscL - cofit
HEPCGN_16345 trkA Trk system potassium transporter TrkA - strong
HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB - cofit
HEPCGN_16355 fmt methionyl-tRNA formyltransferase - no data
HEPCGN_16360 def peptide deformylase - no data
HEPCGN_16365 dprA DNA-protecting protein DprA + cofit
HEPCGN_16370 smg DUF494 domain-containing protein + cofit
HEPCGN_16375 yrdD Uncharacterized protein YrdD + cofit
HEPCGN_16380 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC + no data
HEPCGN_16385 aroE shikimate dehydrogenase + strong

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