Gene info for HEPCGN_16335 in Escherichia coli ECOR38

Name: arfA
Annotation: alternative ribosome-rescue factor ArfA
Type 1: Protein-coding gene
Located on scaffold contig_6, + strand, nucleotides 2,020,026 to 2,020,244
See nucleotide sequence around HEPCGN_16335 or for all of scaffold contig_6

Other databases: NCBI

Nearby Genes

500 ntrpsD and rpoA are separated by 25 nucleotidesrpoA and HEPCGN_16320 are separated by 40 nucleotidesHEPCGN_16320 and yhdN are separated by 106 nucleotidesyhdN and zntR are separated by 10 nucleotideszntR and arfA are separated by 55 nucleotidesarfA and mscL overlap by 4 nucleotidesmscL and trkA are separated by 129 nucleotidestrkA and rsmB are separated by 21 nucleotidesrsmB and fmt are separated by 45 nucleotidesfmt and def are separated by 14 nucleotides HEPCGN_16310: rpsD - 30S ribosomal protein S4, at 2,017,000 to 2,017,620 rpsD HEPCGN_16315: rpoA - DNA-directed RNA polymerase subunit alpha, at 2,017,646 to 2,018,635 rpoA HEPCGN_16320: HEPCGN_16320 - 50S ribosomal protein L17, at 2,018,676 to 2,019,059 _16320 HEPCGN_16325: yhdN - Uncharacterized protein YhdN, at 2,019,166 to 2,019,534 yhdN HEPCGN_16330: zntR - Zn(2+)-responsive transcriptional regulator, at 2,019,545 to 2,019,970 zntR HEPCGN_16335: arfA - alternative ribosome-rescue factor ArfA, at 2,020,026 to 2,020,244 arfA HEPCGN_16340: mscL - large-conductance mechanosensitive channel protein MscL, at 2,020,241 to 2,020,651 mscL HEPCGN_16345: trkA - Trk system potassium transporter TrkA, at 2,020,781 to 2,022,157 trkA HEPCGN_16350: rsmB - 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB, at 2,022,179 to 2,023,468 rsmB HEPCGN_16355: fmt - methionyl-tRNA formyltransferase, at 2,023,514 to 2,024,461 fmt HEPCGN_16360: def - peptide deformylase, at 2,024,476 to 2,024,985 def
Locus Name Description Strand Phenotype
HEPCGN_16310 rpsD 30S ribosomal protein S4 + no data
HEPCGN_16315 rpoA DNA-directed RNA polymerase subunit alpha + no data
HEPCGN_16320 HEPCGN_16320 50S ribosomal protein L17 + no data
HEPCGN_16325 yhdN Uncharacterized protein YhdN + cofit
HEPCGN_16330 zntR Zn(2+)-responsive transcriptional regulator + cofit
HEPCGN_16335 arfA alternative ribosome-rescue factor ArfA + cofit
HEPCGN_16340 mscL large-conductance mechanosensitive channel protein MscL - cofit
HEPCGN_16345 trkA Trk system potassium transporter TrkA - strong
HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB - cofit
HEPCGN_16355 fmt methionyl-tRNA formyltransferase - no data
HEPCGN_16360 def peptide deformylase - no data

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