Gene info for HEPCGN_14545 in Escherichia coli ECOR38

Name: rfaD
Annotation: ADP-glyceromanno-heptose 6-epimerase
Type 1: Protein-coding gene
Located on scaffold contig_6, - strand, nucleotides 1,662,481 to 1,663,413
See nucleotide sequence around HEPCGN_14545 or for all of scaffold contig_6

Other databases: NCBI

Nearby Genes

500 ntrfaJ and HEPCGN_14525 are separated by 78 nucleotidesHEPCGN_14525 and HEPCGN_14530 are separated by 45 nucleotidesHEPCGN_14530 and rfaC are separated by 69 nucleotidesrfaC and rfaF are separated by 3 nucleotidesrfaF and rfaD are separated by 9 nucleotidesrfaD and kbl are separated by 213 nucleotideskbl and tdh are separated by 9 nucleotidestdh and waaH are separated by 238 nucleotideswaaH and yibQ overlap by 14 nucleotidesyibQ and envC are separated by 3 nucleotides HEPCGN_14520: rfaJ - UDP-galactose--(galactosyl) LPS alpha1,2-galactosyltransferase, at 1,656,991 to 1,658,019 rfaJ HEPCGN_14525: HEPCGN_14525 - beta1,3-glucosyltransferase, at 1,658,098 to 1,659,081 _14525 HEPCGN_14530: HEPCGN_14530 - O-antigen ligase domain-containing protein, at 1,659,127 to 1,660,380 _14530 HEPCGN_14535: rfaC - lipopolysaccharide heptosyltransferase RfaC, at 1,660,450 to 1,661,421 rfaC HEPCGN_14540: rfaF - ADP-heptose--LPS heptosyltransferase RfaF, at 1,661,425 to 1,662,471 rfaF HEPCGN_14545: rfaD - ADP-glyceromanno-heptose 6-epimerase, at 1,662,481 to 1,663,413 rfaD HEPCGN_14550: kbl - glycine C-acetyltransferase, at 1,663,627 to 1,664,823 kbl HEPCGN_14555: tdh - L-threonine 3-dehydrogenase, at 1,664,833 to 1,665,858 tdh HEPCGN_14560: waaH - UDP-glucuronate:LPS(HepIII) glycosyltransferase, at 1,666,097 to 1,667,131 waaH HEPCGN_14565: yibQ - Uncharacterized protein YibQ, at 1,667,118 to 1,668,077 yibQ HEPCGN_14570: envC - murein hydrolase activator EnvC, at 1,668,081 to 1,669,340 envC
Locus Name Description Strand Phenotype
HEPCGN_14520 rfaJ UDP-galactose--(galactosyl) LPS alpha1,2-galactosyltransferase + strong
HEPCGN_14525 HEPCGN_14525 beta1,3-glucosyltransferase + strong
HEPCGN_14530 HEPCGN_14530 O-antigen ligase domain-containing protein + strong
HEPCGN_14535 rfaC lipopolysaccharide heptosyltransferase RfaC - no data
HEPCGN_14540 rfaF ADP-heptose--LPS heptosyltransferase RfaF - strong
HEPCGN_14545 rfaD ADP-glyceromanno-heptose 6-epimerase - no data
HEPCGN_14550 kbl glycine C-acetyltransferase + insig.
HEPCGN_14555 tdh L-threonine 3-dehydrogenase + insig.
HEPCGN_14560 waaH UDP-glucuronate:LPS(HepIII) glycosyltransferase + insig.
HEPCGN_14565 yibQ Uncharacterized protein YibQ - insig.
HEPCGN_14570 envC murein hydrolase activator EnvC - strong

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