Gene info for HEPCGN_08285 in Escherichia coli ECOR38

Name: thpR
Annotation: RNA 2',3'-cyclic phosphodiesterase
Type 1: Protein-coding gene
Located on scaffold contig_6, + strand, nucleotides 396,929 to 397,459
See nucleotide sequence around HEPCGN_08285 or for all of scaffold contig_6

Other databases: NCBI

Nearby Genes

500 ntfhuD and fhuC overlap by 1 nucleotidesfhuC and fhuA are separated by 50 nucleotidesfhuA and mrcB are separated by 219 nucleotidesmrcB and hrpB are separated by 93 nucleotideshrpB and thpR are separated by 73 nucleotidesthpR and sfsA are separated by 14 nucleotidessfsA and dksA are separated by 177 nucleotidesdksA and gluQRS are separated by 36 nucleotidesgluQRS and pcnB are separated by 92 nucleotidespcnB and folK overlap by 4 nucleotides HEPCGN_08260: fhuD - Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD, at 387,591 to 388,481 fhuD HEPCGN_08265: fhuC - Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC, at 388,481 to 389,278 fhuC HEPCGN_08270: fhuA - ferrichrome porin FhuA, at 389,329 to 391,578 fhuA HEPCGN_08275: mrcB - bifunctional glycosyl transferase/transpeptidase, at 391,798 to 394,332 mrcB HEPCGN_08280: hrpB - ATP-dependent helicase HrpB, at 394,426 to 396,855 hrpB HEPCGN_08285: thpR - RNA 2',3'-cyclic phosphodiesterase, at 396,929 to 397,459 thpR HEPCGN_08290: sfsA - DNA/RNA nuclease SfsA, at 397,474 to 398,178 sfsA HEPCGN_08295: dksA - RNA polymerase-binding protein DksA, at 398,356 to 398,811 dksA HEPCGN_08300: gluQRS - tRNA glutamyl-Q(34) synthetase GluQRS, at 398,848 to 399,774 gluQRS HEPCGN_08305: pcnB - polynucleotide adenylyltransferase PcnB, at 399,867 to 401,231 pcnB HEPCGN_08310: folK - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase, at 401,228 to 401,707 folK
Locus Name Description Strand Phenotype
HEPCGN_08260 fhuD Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD - insig.
HEPCGN_08265 fhuC Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC - insig.
HEPCGN_08270 fhuA ferrichrome porin FhuA - insig.
HEPCGN_08275 mrcB bifunctional glycosyl transferase/transpeptidase - insig.
HEPCGN_08280 hrpB ATP-dependent helicase HrpB - insig.
HEPCGN_08285 thpR RNA 2',3'-cyclic phosphodiesterase + insig.
HEPCGN_08290 sfsA DNA/RNA nuclease SfsA + insig.
HEPCGN_08295 dksA RNA polymerase-binding protein DksA + strong
HEPCGN_08300 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS + cofit
HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB + strong
HEPCGN_08310 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase + no data

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