Gene info for GFF993 in Variovorax sp. SCN45

Annotation: Type IV pilus biogenesis protein PilF
Type 1: Protein-coding gene
Located on scaffold scaffold00000002, + strand, nucleotides 312,147 to 313,001
See nucleotide sequence around GFF993 or for all of scaffold scaffold00000002

Nearby Genes

500 ntGFF988 and GFF989 are separated by 130 nucleotidesGFF989 and GFF990 overlap by 4 nucleotidesGFF990 and GFF991 are separated by 152 nucleotidesGFF991 and GFF992 are separated by 21 nucleotidesGFF992 and GFF993 are separated by 4 nucleotidesGFF993 and GFF994 overlap by 8 nucleotidesGFF994 and GFF995 overlap by 4 nucleotidesGFF995 and GFF996 are separated by 16 nucleotidesGFF996 and GFF997 are separated by 5 nucleotidesGFF997 and GFF998 are separated by 7 nucleotides GFF988 - LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23), at 306,603 to 307,601 GFF988 GFF989 - Segregation and condensation protein B, at 307,732 to 308,598 GFF989 GFF990 - LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22), at 308,595 to 310,394 GFF990 GFF991 - Nucleoside diphosphate kinase (EC 2.7.4.6), at 310,547 to 310,972 GFF991 GFF992 - 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192), at 310,994 to 312,142 GFF992 GFF993 - Type IV pilus biogenesis protein PilF, at 312,147 to 313,001 GFF993 GFF994 - Cytoskeleton protein RodZ, at 312,994 to 313,959 GFF994 GFF995 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (EC 1.17.7.3), at 313,956 to 315,230 GFF995 GFF996 - Histidyl-tRNA synthetase (EC 6.1.1.21), at 315,247 to 316,557 GFF996 GFF997 - UPF0070 protein YfgM, at 316,563 to 317,255 GFF997 GFF998 - Outer membrane beta-barrel assembly protein BamB, at 317,263 to 318,405 GFF998
Locus Name Description Strand Phenotype
GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) + cofit
GFF989 Segregation and condensation protein B + no data
GFF990 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) + cofit
GFF991 Nucleoside diphosphate kinase (EC 2.7.4.6) + no data
GFF992 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192) + cofit
GFF993 Type IV pilus biogenesis protein PilF + strong
GFF994 Cytoskeleton protein RodZ + insig.
GFF995 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (EC 1.17.7.3) + no data
GFF996 Histidyl-tRNA synthetase (EC 6.1.1.21) + no data
GFF997 UPF0070 protein YfgM + cofit
GFF998 Outer membrane beta-barrel assembly protein BamB + no data

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