Gene info for GFF988 in Variovorax sp. SCN45

Annotation: LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23)
Type 1: Protein-coding gene
Located on scaffold scaffold00000002, + strand, nucleotides 306,603 to 307,601
See nucleotide sequence around GFF988 or for all of scaffold scaffold00000002

Nearby Genes

500 ntGFF983 and GFF984 are separated by 40 nucleotidesGFF984 and GFF985 are separated by 184 nucleotidesGFF985 and GFF986 overlap by 4 nucleotidesGFF986 and GFF987 are separated by 40 nucleotidesGFF987 and GFF988 are separated by 50 nucleotidesGFF988 and GFF989 are separated by 130 nucleotidesGFF989 and GFF990 overlap by 4 nucleotidesGFF990 and GFF991 are separated by 152 nucleotidesGFF991 and GFF992 are separated by 21 nucleotidesGFF992 and GFF993 are separated by 4 nucleotides GFF983 - hypothetical protein, at 301,814 to 302,497 GFF983 GFF984 - Protein phosphatase 2C-like, at 302,538 to 303,230 GFF984 GFF985 - Uncharacterized protein SMc04000, at 303,415 to 303,618 GFF985 GFF986 - DinG family ATP-dependent helicase YoaA, at 303,615 to 305,705 GFF986 GFF987 - Outer membrane beta-barrel assembly protein BamD, at 305,746 to 306,552 GFF987 GFF988 - LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23), at 306,603 to 307,601 GFF988 GFF989 - Segregation and condensation protein B, at 307,732 to 308,598 GFF989 GFF990 - LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22), at 308,595 to 310,394 GFF990 GFF991 - Nucleoside diphosphate kinase (EC 2.7.4.6), at 310,547 to 310,972 GFF991 GFF992 - 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192), at 310,994 to 312,142 GFF992 GFF993 - Type IV pilus biogenesis protein PilF, at 312,147 to 313,001 GFF993
Locus Name Description Strand Phenotype
GFF983 hypothetical protein + insig.
GFF984 Protein phosphatase 2C-like - insig.
GFF985 Uncharacterized protein SMc04000 + no data
GFF986 DinG family ATP-dependent helicase YoaA + insig.
GFF987 Outer membrane beta-barrel assembly protein BamD - no data
GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) + cofit
GFF989 Segregation and condensation protein B + no data
GFF990 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) + cofit
GFF991 Nucleoside diphosphate kinase (EC 2.7.4.6) + no data
GFF992 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192) + cofit
GFF993 Type IV pilus biogenesis protein PilF + strong

Or browse nearby genes

Or see the comparative fitness browser