Gene info for GFF8 in Variovorax sp. SCN45

Annotation: RND efflux system, outer membrane lipoprotein, NodT family
Type 1: Protein-coding gene
Located on scaffold scaffold00000001, - strand, nucleotides 6,078 to 7,592
See nucleotide sequence around GFF8 or for all of scaffold scaffold00000001

Nearby Genes

500 ntGFF3 and GFF4 are separated by 7 nucleotidesGFF4 and GFF5 overlap by 4 nucleotidesGFF5 and GFF6 overlap by 37 nucleotidesGFF6 and GFF7 overlap by 4 nucleotidesGFF7 and GFF8 overlap by 4 nucleotidesGFF8 and GFF9 are separated by 19 nucleotidesGFF9 and GFF10 overlap by 8 nucleotidesGFF10 and GFF11 are separated by 179 nucleotidesGFF11 and GFF12 overlap by 8 nucleotidesGFF12 and GFF13 are separated by 35 nucleotides GFF3 - VapB protein (antitoxin to VapC), at 3,603 to 3,860 GFF3 GFF4 - VapC toxin protein, at 3,868 to 4,281 GFF4 GFF5 - FIG00537881: hypothetical protein, at 4,278 to 5,351 GFF5 GFF6 - hypothetical protein, at 5,315 to 5,710 GFF6 GFF7 - no description, at 5,707 to 6,081 GFF7 GFF8 - RND efflux system, outer membrane lipoprotein, NodT family, at 6,078 to 7,592 GFF8 GFF9 - CzcABC family efflux RND transporter, transmembrane protein, at 7,612 to 10,707 GFF9 GFF10 - Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family, at 10,700 to 11,854 GFF10 GFF11 - Two-component transcriptional response regulator, OmpR family, at 12,034 to 12,741 GFF11 GFF12 - Two-component system sensor histidine kinase, at 12,734 to 14,143 GFF12 GFF13 - BUG/TctC family periplasmic protein, at 14,179 to 14,289 GFF13
Locus Name Description Strand Phenotype
GFF3 VapB protein (antitoxin to VapC) + no data
GFF4 VapC toxin protein + insig.
GFF5 FIG00537881: hypothetical protein + insig.
GFF6 hypothetical protein - insig.
GFF7 no description - insig.
GFF8 RND efflux system, outer membrane lipoprotein, NodT family - insig.
GFF9 CzcABC family efflux RND transporter, transmembrane protein - insig.
GFF10 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family - insig.
GFF11 Two-component transcriptional response regulator, OmpR family + insig.
GFF12 Two-component system sensor histidine kinase + insig.
GFF13 BUG/TctC family periplasmic protein + no data

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