Gene info for GFF7146 in Variovorax sp. SCN45

Annotation: Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster
Type 1: Protein-coding gene
Located on scaffold scaffold00000033, - strand, nucleotides 12,084 to 13,388
See nucleotide sequence around GFF7146 or for all of scaffold scaffold00000033

Nearby Genes

500 ntGFF7141 and GFF7142 are separated by 19 nucleotidesGFF7142 and GFF7143 are separated by 91 nucleotidesGFF7143 and GFF7144 are separated by 29 nucleotidesGFF7144 and GFF7145 are separated by 16 nucleotidesGFF7145 and GFF7146 overlap by 4 nucleotidesGFF7146 and GFF7147 overlap by 4 nucleotidesGFF7147 and GFF7148 overlap by 4 nucleotidesGFF7148 and GFF7149 are separated by 11 nucleotidesGFF7149 and GFF7150 are separated by 14 nucleotidesGFF7150 and GFF7151 are separated by 51 nucleotides GFF7141 - FIG00537874: hypothetical protein, at 8,933 to 9,253 GFF7141 GFF7142 - Transcriptional regulator, LysR family, at 9,273 to 10,160 GFF7142 GFF7143 - Permease of the drug/metabolite transporter (DMT) superfamily, at 10,252 to 11,220 GFF7143 GFF7144 - KEGG: 4-oxalocrotonate tautomerase , at 11,250 to 11,372 GFF7144 GFF7145 - Transcriptional regulator, GntR family, at 11,389 to 12,087 GFF7145 GFF7146 - Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster, at 12,084 to 13,388 GFF7146 GFF7147 - Hypothetical, similar to sarcosine oxidase alpha subunit, 2Fe-2S domain, at 13,385 to 13,639 GFF7147 GFF7148 - D-amino-acid oxidase (EC 1.4.3.3), at 13,636 to 14,739 GFF7148 GFF7149 - 4-hydroxyproline epimerase (EC 5.1.1.8), at 14,751 to 15,686 GFF7149 GFF7150 - Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1), at 15,701 to 16,843 GFF7150 GFF7151 - 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22), at 16,895 to 17,809 GFF7151
Locus Name Description Strand Phenotype
GFF7141 FIG00537874: hypothetical protein + insig.
GFF7142 Transcriptional regulator, LysR family - insig.
GFF7143 Permease of the drug/metabolite transporter (DMT) superfamily + insig.
GFF7144 KEGG: 4-oxalocrotonate tautomerase + no data
GFF7145 Transcriptional regulator, GntR family - insig.
GFF7146 Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster - insig.
GFF7147 Hypothetical, similar to sarcosine oxidase alpha subunit, 2Fe-2S domain - no data
GFF7148 D-amino-acid oxidase (EC 1.4.3.3) - insig.
GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) - sig.
GFF7150 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) - insig.
GFF7151 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) - insig.

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