Gene info for GFF7142 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, LysR family
Type 1: Protein-coding gene
Located on scaffold scaffold00000033, - strand, nucleotides 9,273 to 10,160
See nucleotide sequence around GFF7142 or for all of scaffold scaffold00000033

Nearby Genes

500 ntGFF7137 and GFF7138 are separated by 84 nucleotidesGFF7138 and GFF7139 overlap by 26 nucleotidesGFF7139 and GFF7140 are separated by 59 nucleotidesGFF7140 and GFF7141 are separated by 93 nucleotidesGFF7141 and GFF7142 are separated by 19 nucleotidesGFF7142 and GFF7143 are separated by 91 nucleotidesGFF7143 and GFF7144 are separated by 29 nucleotidesGFF7144 and GFF7145 are separated by 16 nucleotidesGFF7145 and GFF7146 overlap by 4 nucleotidesGFF7146 and GFF7147 overlap by 4 nucleotides GFF7137 - Translation initiation factor 1, at 5,393 to 5,665 GFF7137 GFF7138 - ATP-dependent 23S rRNA helicase DbpA, at 5,750 to 7,180 GFF7138 GFF7139 - MATE efflux family protein, at 7,155 to 8,609 GFF7139 GFF7140 - FIG00349159: hypothetical protein, at 8,669 to 8,839 GFF7140 GFF7141 - FIG00537874: hypothetical protein, at 8,933 to 9,253 GFF7141 GFF7142 - Transcriptional regulator, LysR family, at 9,273 to 10,160 GFF7142 GFF7143 - Permease of the drug/metabolite transporter (DMT) superfamily, at 10,252 to 11,220 GFF7143 GFF7144 - KEGG: 4-oxalocrotonate tautomerase , at 11,250 to 11,372 GFF7144 GFF7145 - Transcriptional regulator, GntR family, at 11,389 to 12,087 GFF7145 GFF7146 - Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster, at 12,084 to 13,388 GFF7146 GFF7147 - Hypothetical, similar to sarcosine oxidase alpha subunit, 2Fe-2S domain, at 13,385 to 13,639 GFF7147
Locus Name Description Strand Phenotype
GFF7137 Translation initiation factor 1 + no data
GFF7138 ATP-dependent 23S rRNA helicase DbpA + insig.
GFF7139 MATE efflux family protein - insig.
GFF7140 FIG00349159: hypothetical protein + insig.
GFF7141 FIG00537874: hypothetical protein + insig.
GFF7142 Transcriptional regulator, LysR family - insig.
GFF7143 Permease of the drug/metabolite transporter (DMT) superfamily + insig.
GFF7144 KEGG: 4-oxalocrotonate tautomerase + no data
GFF7145 Transcriptional regulator, GntR family - insig.
GFF7146 Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster - insig.
GFF7147 Hypothetical, similar to sarcosine oxidase alpha subunit, 2Fe-2S domain - no data

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