Gene info for GFF6854 in Variovorax sp. SCN45

Annotation: RNA polymerase ECF-type sigma factor
Type 1: Protein-coding gene
Located on scaffold scaffold00000027, - strand, nucleotides 49,627 to 50,187
See nucleotide sequence around GFF6854 or for all of scaffold scaffold00000027

Nearby Genes

500 ntGFF6849 and GFF6850 are separated by 70 nucleotidesGFF6850 and GFF6851 are separated by 30 nucleotidesGFF6851 and GFF6852 are separated by 75 nucleotidesGFF6852 and GFF6853 are separated by 157 nucleotidesGFF6853 and GFF6854 are separated by 22 nucleotidesGFF6854 and GFF6855 are separated by 12 nucleotidesGFF6855 and GFF6856 are separated by 241 nucleotidesGFF6856 and GFF6857 are separated by 105 nucleotidesGFF6857 and GFF6858 are separated by 10 nucleotidesGFF6858 and GFF6859 are separated by 110 nucleotides GFF6849 - MotA/TolQ/ExbB proton channel family protein, at 31,036 to 32,844 GFF6849 GFF6850 - Hemolysin activation/secretion protein associated with VreARI signalling system, at 32,915 to 34,564 GFF6850 GFF6851 - no description, at 34,595 to 34,741 GFF6851 GFF6852 - Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system, at 34,817 to 48,493 GFF6852 GFF6853 - Putative transmembrane sensor, at 48,651 to 49,604 GFF6853 GFF6854 - RNA polymerase ECF-type sigma factor, at 49,627 to 50,187 GFF6854 GFF6855 - hypothetical protein, at 50,200 to 50,880 GFF6855 GFF6856 - DipZ protein, at 51,122 to 51,772 GFF6856 GFF6857 - hypothetical protein, at 51,878 to 52,006 GFF6857 GFF6858 - no description, at 52,017 to 52,169 GFF6858 GFF6859 - Two-component transcriptional response regulator, OmpR family, at 52,280 to 53,020 GFF6859
Locus Name Description Strand Phenotype
GFF6849 MotA/TolQ/ExbB proton channel family protein - insig.
GFF6850 Hemolysin activation/secretion protein associated with VreARI signalling system - insig.
GFF6851 no description + insig.
GFF6852 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system - insig.
GFF6853 Putative transmembrane sensor - insig.
GFF6854 RNA polymerase ECF-type sigma factor - insig.
GFF6855 hypothetical protein - insig.
GFF6856 DipZ protein + insig.
GFF6857 hypothetical protein + insig.
GFF6858 no description - insig.
GFF6859 Two-component transcriptional response regulator, OmpR family - insig.

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