Gene info for GFF6602 in Variovorax sp. SCN45

Annotation: Type IV secretory pathway, protease TraF
Type 1: Protein-coding gene
Located on scaffold scaffold00000023, - strand, nucleotides 49,152 to 49,727
See nucleotide sequence around GFF6602 or for all of scaffold scaffold00000023

Nearby Genes

500 ntGFF6597 and GFF6598 are separated by 717 nucleotidesGFF6598 and GFF6599 are separated by 82 nucleotidesGFF6599 and GFF6600 overlap by 4 nucleotidesGFF6600 and GFF6601 overlap by 15 nucleotidesGFF6601 and GFF6602 are separated by 448 nucleotidesGFF6602 and GFF6603 overlap by 4 nucleotidesGFF6603 and GFF6604 overlap by 4 nucleotidesGFF6604 and GFF6605 overlap by 4 nucleotidesGFF6605 and GFF6606 overlap by 4 nucleotidesGFF6606 and GFF6607 are separated by 26 nucleotides GFF6597 - Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF, at 41,177 to 42,478 GFF6597 GFF6598 - Putative formate dehydrogenase oxidoreductase protein, at 43,196 to 45,472 GFF6598 GFF6599 - NAD-dependent formate dehydrogenase alpha subunit, at 45,555 to 45,800 GFF6599 GFF6600 - Sulfur carrier protein FdhD, at 45,797 to 46,732 GFF6600 GFF6601 - Type IV secretory pathway, VirD2 components (relaxase), at 46,718 to 48,703 GFF6601 GFF6602 - Type IV secretory pathway, protease TraF, at 49,152 to 49,727 GFF6602 GFF6603 - Glycosidases, at 49,724 to 50,269 GFF6603 GFF6604 - FIG00457034: hypothetical protein, at 50,266 to 50,538 GFF6604 GFF6605 - ParA-like protein, at 50,535 to 51,173 GFF6605 GFF6606 - no description, at 51,170 to 51,397 GFF6606 GFF6607 - Plasmid replication initiator protein, at 51,424 to 52,290 GFF6607
Locus Name Description Strand Phenotype
GFF6597 Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF + insig.
GFF6598 Putative formate dehydrogenase oxidoreductase protein + insig.
GFF6599 NAD-dependent formate dehydrogenase alpha subunit + insig.
GFF6600 Sulfur carrier protein FdhD + insig.
GFF6601 Type IV secretory pathway, VirD2 components (relaxase) - insig.
GFF6602 Type IV secretory pathway, protease TraF - insig.
GFF6603 Glycosidases - insig.
GFF6604 FIG00457034: hypothetical protein - insig.
GFF6605 ParA-like protein - no data
GFF6606 no description - insig.
GFF6607 Plasmid replication initiator protein - insig.

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