Gene info for GFF6581 in Variovorax sp. SCN45

Annotation: Coupling protein VirD4, ATPase required for T-DNA transfer
Type 1: Protein-coding gene
Located on scaffold scaffold00000023, - strand, nucleotides 21,671 to 23,680
See nucleotide sequence around GFF6581 or for all of scaffold scaffold00000023

Nearby Genes

500 ntGFF6576 and GFF6577 are separated by 12 nucleotidesGFF6577 and GFF6578 overlap by 4 nucleotidesGFF6578 and GFF6579 overlap by 4 nucleotidesGFF6579 and GFF6580 overlap by 4 nucleotidesGFF6580 and GFF6581 overlap by 4 nucleotidesGFF6581 and GFF6582 are separated by 217 nucleotidesGFF6582 and GFF6583 are separated by 24 nucleotidesGFF6583 and GFF6584 are separated by 336 nucleotidesGFF6584 and GFF6585 are separated by 19 nucleotidesGFF6585 and GFF6586 overlap by 4 nucleotides GFF6576 - Conjugative transfer protein TrbE, at 17,046 to 19,520 GFF6576 GFF6577 - Conjugative transfer protein TrbD, at 19,533 to 19,805 GFF6577 GFF6578 - Conjugative transfer protein TrbC, at 19,802 to 20,179 GFF6578 GFF6579 - Conjugative transfer protein TrbB, at 20,176 to 21,213 GFF6579 GFF6580 - CopG domain-containing protein, at 21,210 to 21,674 GFF6580 GFF6581 - Coupling protein VirD4, ATPase required for T-DNA transfer, at 21,671 to 23,680 GFF6581 GFF6582 - Conjugative transfer protein TrbK, at 23,898 to 24,125 GFF6582 GFF6583 - Transcriptional regulator, LysR family, at 24,150 to 25,064 GFF6583 GFF6584 - Pyruvate kinase (EC 2.7.1.40), at 25,401 to 26,834 GFF6584 GFF6585 - D-glycerate 2-kinase (EC 2.7.1.165), at 26,854 to 28,179 GFF6585 GFF6586 - 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), at 28,176 to 29,084 GFF6586
Locus Name Description Strand Phenotype
GFF6576 Conjugative transfer protein TrbE - insig.
GFF6577 Conjugative transfer protein TrbD - no data
GFF6578 Conjugative transfer protein TrbC - no data
GFF6579 Conjugative transfer protein TrbB - insig.
GFF6580 CopG domain-containing protein - insig.
GFF6581 Coupling protein VirD4, ATPase required for T-DNA transfer - insig.
GFF6582 Conjugative transfer protein TrbK - no data
GFF6583 Transcriptional regulator, LysR family - insig.
GFF6584 Pyruvate kinase (EC 2.7.1.40) - sig.
GFF6585 D-glycerate 2-kinase (EC 2.7.1.165) - insig.
GFF6586 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) - insig.

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