Gene info for GFF6578 in Variovorax sp. SCN45

Annotation: Conjugative transfer protein TrbC
Type 1: Protein-coding gene
Located on scaffold scaffold00000023, - strand, nucleotides 19,802 to 20,179
See nucleotide sequence around GFF6578 or for all of scaffold scaffold00000023

Nearby Genes

500 ntGFF6573 and GFF6574 are separated by 12 nucleotidesGFF6574 and GFF6575 are separated by 12 nucleotidesGFF6575 and GFF6576 overlap by 4 nucleotidesGFF6576 and GFF6577 are separated by 12 nucleotidesGFF6577 and GFF6578 overlap by 4 nucleotidesGFF6578 and GFF6579 overlap by 4 nucleotidesGFF6579 and GFF6580 overlap by 4 nucleotidesGFF6580 and GFF6581 overlap by 4 nucleotidesGFF6581 and GFF6582 are separated by 217 nucleotidesGFF6582 and GFF6583 are separated by 24 nucleotides GFF6573 - Conjugative transfer protein TrbF, at 14,224 to 14,928 GFF6573 GFF6574 - Conjugative transfer protein TrbL, at 14,941 to 16,266 GFF6574 GFF6575 - Conjugative transfer protein TrbJ, at 16,279 to 17,049 GFF6575 GFF6576 - Conjugative transfer protein TrbE, at 17,046 to 19,520 GFF6576 GFF6577 - Conjugative transfer protein TrbD, at 19,533 to 19,805 GFF6577 GFF6578 - Conjugative transfer protein TrbC, at 19,802 to 20,179 GFF6578 GFF6579 - Conjugative transfer protein TrbB, at 20,176 to 21,213 GFF6579 GFF6580 - CopG domain-containing protein, at 21,210 to 21,674 GFF6580 GFF6581 - Coupling protein VirD4, ATPase required for T-DNA transfer, at 21,671 to 23,680 GFF6581 GFF6582 - Conjugative transfer protein TrbK, at 23,898 to 24,125 GFF6582 GFF6583 - Transcriptional regulator, LysR family, at 24,150 to 25,064 GFF6583
Locus Name Description Strand Phenotype
GFF6573 Conjugative transfer protein TrbF - insig.
GFF6574 Conjugative transfer protein TrbL - insig.
GFF6575 Conjugative transfer protein TrbJ - insig.
GFF6576 Conjugative transfer protein TrbE - insig.
GFF6577 Conjugative transfer protein TrbD - no data
GFF6578 Conjugative transfer protein TrbC - no data
GFF6579 Conjugative transfer protein TrbB - insig.
GFF6580 CopG domain-containing protein - insig.
GFF6581 Coupling protein VirD4, ATPase required for T-DNA transfer - insig.
GFF6582 Conjugative transfer protein TrbK - no data
GFF6583 Transcriptional regulator, LysR family - insig.

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