Gene info for GFF6543 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, LysR family
Type 1: Protein-coding gene
Located on scaffold scaffold00000022, - strand, nucleotides 40,159 to 41,133
See nucleotide sequence around GFF6543 or for all of scaffold scaffold00000022

Nearby Genes

500 ntGFF6538 and GFF6539 overlap by 13 nucleotidesGFF6539 and GFF6540 are separated by 4 nucleotidesGFF6540 and GFF6541 are separated by 26 nucleotidesGFF6541 and GFF6542 are separated by 183 nucleotidesGFF6542 and GFF6543 overlap by 4 nucleotidesGFF6543 and GFF6544 are separated by 90 nucleotidesGFF6544 and GFF6545 are separated by 10 nucleotidesGFF6545 and GFF6546 are separated by 191 nucleotidesGFF6546 and GFF6547 are separated by 51 nucleotidesGFF6547 and GFF6548 are separated by 72 nucleotides GFF6538 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 34,125 to 35,753 GFF6538 GFF6539 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 35,741 to 37,291 GFF6539 GFF6540 - FIG00994002: hypothetical protein, at 37,296 to 38,432 GFF6540 GFF6541 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 38,459 to 39,262 GFF6541 GFF6542 - Transcriptional regulator, AcrR family, at 39,446 to 40,162 GFF6542 GFF6543 - Transcriptional regulator, LysR family, at 40,159 to 41,133 GFF6543 GFF6544 - D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4), at 41,224 to 42,630 GFF6544 GFF6545 - Uncharacterized MFS-type transporter, at 42,641 to 43,960 GFF6545 GFF6546 - hypothetical protein, at 44,152 to 45,111 GFF6546 GFF6547 - Glutathione S-transferase (EC 2.5.1.18), at 45,163 to 45,867 GFF6547 GFF6548 - hypothetical protein, at 45,940 to 46,593 GFF6548
Locus Name Description Strand Phenotype
GFF6538 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) + insig.
GFF6539 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) - insig.
GFF6540 FIG00994002: hypothetical protein - insig.
GFF6541 Oxidoreductase, short-chain dehydrogenase/reductase family - no data
GFF6542 Transcriptional regulator, AcrR family + insig.
GFF6543 Transcriptional regulator, LysR family - insig.
GFF6544 D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4) - insig.
GFF6545 Uncharacterized MFS-type transporter - insig.
GFF6546 hypothetical protein + insig.
GFF6547 Glutathione S-transferase (EC 2.5.1.18) + insig.
GFF6548 hypothetical protein + insig.

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