Gene info for GFF6290 in Variovorax sp. SCN45

Annotation: RNA polymerase sigma-54 factor RpoN
Type 1: Protein-coding gene
Located on scaffold scaffold00000019, - strand, nucleotides 79,558 to 81,159
See nucleotide sequence around GFF6290 or for all of scaffold scaffold00000019

Nearby Genes

500 ntGFF6285 and GFF6286 are separated by 58 nucleotidesGFF6286 and GFF6287 are separated by 33 nucleotidesGFF6287 and GFF6288 are separated by 145 nucleotidesGFF6288 and GFF6289 are separated by 19 nucleotidesGFF6289 and GFF6290 are separated by 137 nucleotidesGFF6290 and GFF6291 are separated by 17 nucleotidesGFF6291 and GFF6292 overlap by 4 nucleotidesGFF6292 and GFF6293 are separated by 125 nucleotidesGFF6293 and GFF6294 are separated by 152 nucleotidesGFF6294 and GFF6295 are separated by 11 nucleotides GFF6285 - Probable signal peptide protein, at 75,479 to 76,060 GFF6285 GFF6286 - Probable signal peptide protein, at 76,119 to 76,754 GFF6286 GFF6287 - no description, at 76,788 to 77,048 GFF6287 GFF6288 - L-lysine permease, at 77,194 to 77,838 GFF6288 GFF6289 - Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC, at 77,858 to 79,420 GFF6289 GFF6290 - RNA polymerase sigma-54 factor RpoN, at 79,558 to 81,159 GFF6290 GFF6291 - Lipopolysaccharide ABC transporter, ATP-binding protein LptB, at 81,177 to 81,971 GFF6291 GFF6292 - Lipopolysaccharide export system protein LptA, at 81,968 to 82,678 GFF6292 GFF6293 - Periplasmic thiol:disulfide interchange protein DsbA, at 82,804 to 83,451 GFF6293 GFF6294 - Cell division protein, at 83,604 to 84,368 GFF6294 GFF6295 - Arginyl-tRNA synthetase (EC 6.1.1.19), at 84,380 to 86,065 GFF6295
Locus Name Description Strand Phenotype
GFF6285 Probable signal peptide protein + insig.
GFF6286 Probable signal peptide protein + insig.
GFF6287 no description - insig.
GFF6288 L-lysine permease + insig.
GFF6289 Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC - insig.
GFF6290 RNA polymerase sigma-54 factor RpoN - strong
GFF6291 Lipopolysaccharide ABC transporter, ATP-binding protein LptB - no data
GFF6292 Lipopolysaccharide export system protein LptA - no data
GFF6293 Periplasmic thiol:disulfide interchange protein DsbA - sig.
GFF6294 Cell division protein - cofit
GFF6295 Arginyl-tRNA synthetase (EC 6.1.1.19) - no data

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